RNA–Protein interactions for RNA: ENST00000465628.1

SCAP-209, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-209ENST00000465628 PURAQ00577 322 aaKnown RBP17.95■□□□□ 0.46
SCAP-209ENST00000465628 PGM5Q15124 567 aa17.95■□□□□ 0.46
SCAP-209ENST00000465628 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
SCAP-209ENST00000465628 LAMA3Q16787 3333 aa17.95■□□□□ 0.46
SCAP-209ENST00000465628 SORBS3O60504 671 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 KPNA6O60684 536 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 HSPA4P34932 840 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 CDK7P50613 346 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 GHRHRQ02643 423 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 TSGA10IPQ3SY00 556 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 ERICH6BQ5W0A0 696 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 AFG1LQ8WV93 481 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 SEZ6LQ9BYH1 1024 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 TBX21Q9UL17 535 aa17.94■□□□□ 0.46
SCAP-209ENST00000465628 TIMP1P01033 207 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 MMP3P08254 477 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 CPA1P15085 419 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 ITGB8P26012 769 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 PSMA5P28066 241 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 LRIT3Q3SXY7 679 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 GNPTABQ3T906 1256 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 CCDC62Q6P9F0 684 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
SCAP-209ENST00000465628 ZFP91Q96JP5 570 aaPredicted RBP17.93■□□□□ 0.46
SCAP-209ENST00000465628 RNPC3Q96LT9 517 aaKnown RBP17.93■□□□□ 0.46
SCAP-209ENST00000465628 HIPK3Q9H422 1215 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 NOD1Q9Y239 953 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 SNX14Q9Y5W7 946 aa17.93■□□□□ 0.46
SCAP-209ENST00000465628 B4GALT4O60513 344 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 CASTP20810 708 aaKnown RBP17.92■□□□□ 0.46
SCAP-209ENST00000465628 METAP2P50579 478 aaKnown RBP eCLIP17.92■□□□□ 0.465e-10■□□□□ 11.3
SCAP-209ENST00000465628 EXOSC10Q01780 885 aaKnown RBP17.92■□□□□ 0.46
SCAP-209ENST00000465628 ARHGAP1Q07960 439 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 PPIGQ13427 754 aaKnown RBP eCLIP17.92■□□□□ 0.463e-7■□□□□ 8.2
SCAP-209ENST00000465628 SHHQ15465 462 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 C9orf50Q5SZB4 431 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 KCNV1Q6PIU1 500 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 USP17L6PQ6QN14 398 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 Q6ZUG5 572 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 DHX37Q8IY37 1157 aaKnown RBP17.92■□□□□ 0.46
SCAP-209ENST00000465628 TMEM199Q8N511 208 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 TRPV6Q9H1D0 765 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 PSTPIP2Q9H939 334 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 BRPF3Q9ULD4 1205 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 CNTNAP5Q8WYK1 1306 aa17.92■□□□□ 0.46
SCAP-209ENST00000465628 A6NJR5 290 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 SPDYE3A6NKU9 549 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 NAPAP54920 295 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 LAMC2Q13753 1193 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 DGKDQ16760 1214 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 VSIG10LQ86VR7 867 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 SLC43A3Q8NBI5 491 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 PPP1R13LQ8WUF5 828 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 BRF1Q92994 677 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 ALDH8A1Q9H2A2 487 aaPredicted RBP17.91■□□□□ 0.46
SCAP-209ENST00000465628 TRMT13Q9NUP7 481 aaKnown RBP17.91■□□□□ 0.46
SCAP-209ENST00000465628 DDX41Q9UJV9 622 aaKnown RBP17.91■□□□□ 0.46
SCAP-209ENST00000465628 SCN10AQ9Y5Y9 1956 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 GRIN2DO15399 1336 aa17.91■□□□□ 0.46
SCAP-209ENST00000465628 MYH7BA7E2Y1 1941 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 GGPS1O95749 300 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 SUPT20HL2P0C7V6 817 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 ZNF286BP0CG31 522 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 UBA1P22314 1058 aaKnown RBP17.9■□□□□ 0.46
SCAP-209ENST00000465628 CYP2C18P33260 490 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 UBE2SQ16763 222 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 NBPF20Q3BBV1 942 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 MFSD5Q6N075 450 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 SPATA33Q96N06 139 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 EHMT1Q9H9B1 1298 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 MLXIPQ9HAP2 919 aa17.9■□□□□ 0.46
SCAP-209ENST00000465628 SZT2Q5T011 3432 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 CCDC196A0A1B0GTZ2 297 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 PIK3CDO00329 1044 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 NOP56O00567 594 aaKnown RBP17.89■□□□□ 0.45
SCAP-209ENST00000465628 STAM2O75886 525 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 CD4P01730 458 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 RPS6KB1P23443 525 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 PPTC7Q8NI37 304 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 KATNAL1Q9BW62 490 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 RTEL1Q9NZ71 1219 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 FRMPD4Q14CM0 1322 aa17.89■□□□□ 0.45
SCAP-209ENST00000465628 CYP2C9P11712 490 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 CSF2RAP15509 400 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 RCAN1P53805 252 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 EPHB4P54760 987 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 CCL23P55773 120 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 WWC2Q6AWC2 1192 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 NFRKBQ6P4R8 1299 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 DEFB123Q8N688 67 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 KCNB2Q92953 911 aa17.88■□□□□ 0.45
SCAP-209ENST00000465628 MEIS2O14770 477 aa17.87■□□□□ 0.45
SCAP-209ENST00000465628 FIBPO43427 364 aa17.87■□□□□ 0.45
SCAP-209ENST00000465628 RGS20O76081 388 aa17.87■□□□□ 0.45
SCAP-209ENST00000465628 ADCY7P51828 1080 aa17.87■□□□□ 0.45
SCAP-209ENST00000465628 AKAP17AQ02040 695 aaKnown RBP17.87■□□□□ 0.45
SCAP-209ENST00000465628 SP4Q02446 784 aa17.87■□□□□ 0.45
SCAP-209ENST00000465628 CELF3Q5SZQ8 465 aaKnown RBP17.87■□□□□ 0.45
SCAP-209ENST00000465628 PCNX4Q63HM2 1172 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms