RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 AGBL1Q96MI9 1066 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 UBAC1Q9BSL1 405 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.94■□□□□ 0.14
HDAC6-215ENST00000465457 TEX13BQ9BXU2 312 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 SWAP70Q9UH65 585 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 CCDC69A6NI79 296 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 H3BQV1 296 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 ZBTB43O43298 467 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 POU3F3P20264 500 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-215ENST00000465457 CDK8P49336 464 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 METAP2P50579 478 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC6-215ENST00000465457 PDE4BQ07343 736 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 ITGA7Q13683 1181 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 CTR9Q6PD62 1173 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 APOA5Q6Q788 366 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 NFXL1Q6ZNB6 911 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 CYB5R4Q7L1T6 521 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 ZNF467Q7Z7K2 595 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-215ENST00000465457 CCDC144CPQ8IYA2 1237 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 CPXCR1Q8N123 301 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 IGDCC4Q8TDY8 1250 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 ARNTL2Q8WYA1 636 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 SLF1Q9BQI6 1058 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 ABHD16BQ9H3Z7 469 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 LY9Q9HBG7 655 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 TOMM22Q9NS69 142 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 ZSWIM5Q9P217 1185 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 BRPF3Q9ULD4 1205 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 ZNF318Q5VUA4 2279 aa15.93■□□□□ 0.14
HDAC6-215ENST00000465457 TRIP12Q14669 1992 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-215ENST00000465457 CCDC196A0A1B0GTZ2 297 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 GTPBP6O43824 516 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-215ENST00000465457 JAK2O60674 1132 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 LPXNO60711 386 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 PRPF40AO75400 957 aaKnown RBP15.92■□□□□ 0.14
HDAC6-215ENST00000465457 COPB2P35606 906 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 CNTN2Q02246 1040 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 WTAPQ15007 396 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 CCDC178Q5BJE1 867 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 FOXD4L5Q5VV16 416 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-215ENST00000465457 ATL3Q6DD88 541 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 DEFB128Q7Z7B8 93 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 IQCA1Q86XH1 822 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 FOXD4L4Q8WXT5 416 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-215ENST00000465457 SPC25Q9HBM1 224 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 ZNF287Q9HBT7 754 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 RAVER2Q9HCJ3 691 aaKnown RBP15.92■□□□□ 0.14
HDAC6-215ENST00000465457 SLC12A7Q9Y666 1083 aa15.92■□□□□ 0.14
HDAC6-215ENST00000465457 NKX3-2P78367 333 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 CCT2P78371 535 aaKnown RBP15.91■□□□□ 0.14
HDAC6-215ENST00000465457 KRT85P78386 507 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 TAP1Q03518 808 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 GRB10Q13322 594 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 C16orf86Q6ZW13 317 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 TLK2Q86UE8 772 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 PPP1R13LQ8WUF5 828 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 HLA-CQ95604 372 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 SYAP1Q96A49 352 aaPredicted RBP15.91■□□□□ 0.14
HDAC6-215ENST00000465457 GOPCQ9HD26 462 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 COG5Q9UP83 839 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 GNEQ9Y223 722 aaKnown RBP15.91■□□□□ 0.14
HDAC6-215ENST00000465457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
HDAC6-215ENST00000465457 STK36Q9NRP7 1315 aa15.91■□□□□ 0.14
HDAC6-215ENST00000465457 SIP14410 1827 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 SCN10AQ9Y5Y9 1956 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 USP17L21D6R901 530 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 PI4K2BG5E9Z4 385 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 CTDNEP1O95476 244 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 NDUFB10O96000 172 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 CALM1P0DP23 149 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 CALM2P0DP24 149 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 CALM3P0DP25 149 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 CYP2C9P11712 490 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 DEKP35659 375 aaKnown RBP15.9■□□□□ 0.14
HDAC6-215ENST00000465457 MRE11P49959 708 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 FSCN1Q16658 493 aaKnown RBP15.9■□□□□ 0.14
HDAC6-215ENST00000465457 RRP12Q5JTH9 1297 aaKnown RBP15.9■□□□□ 0.14
HDAC6-215ENST00000465457 C12orf60Q5U649 245 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 WASF1Q92558 559 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 SCAND2PQ9GZW5 306 aaPredicted RBP15.9■□□□□ 0.14
HDAC6-215ENST00000465457 HOMER2Q9NSB8 354 aa15.9■□□□□ 0.14
HDAC6-215ENST00000465457 TRMT13Q9NUP7 481 aaKnown RBP15.9■□□□□ 0.14
HDAC6-215ENST00000465457 GOLGA8AA7E2F4 631 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 SMPD1P17405 629 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 TNFAIP2Q03169 654 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 L1TD1Q5T7N2 865 aaKnown RBP15.89■□□□□ 0.13
HDAC6-215ENST00000465457 TMCO2Q7Z6W1 182 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-215ENST00000465457 ANKRD35Q8N283 1001 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 GDPD5Q8WTR4 605 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 CCDC17Q96LX7 622 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 KANSL2Q9H9L4 492 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 NCOA5Q9HCD5 579 aaKnown RBP15.89■□□□□ 0.13
HDAC6-215ENST00000465457 GPHNQ9NQX3 736 aaPredicted RBP15.89■□□□□ 0.13
HDAC6-215ENST00000465457 PDGFCQ9NRA1 345 aa15.89■□□□□ 0.13
HDAC6-215ENST00000465457 LCHNA4D1U4 455 aa15.88■□□□□ 0.13
HDAC6-215ENST00000465457 UBE2HP62256 183 aa15.88■□□□□ 0.13
HDAC6-215ENST00000465457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.88■□□□□ 0.13
HDAC6-215ENST00000465457 STK11IPQ8N1F8 1099 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms