RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 KANSL2Q9H9L4 492 aa9.4□□□□□ -0.9
UBE4B-205ENST00000465408 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.4□□□□□ -0.9
UBE4B-205ENST00000465408 NYAP2Q9P242 653 aa9.4□□□□□ -0.9
UBE4B-205ENST00000465408 PCDHA5Q9Y5H7 936 aa9.4□□□□□ -0.9
UBE4B-205ENST00000465408 GREB1LQ9C091 1923 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-205ENST00000465408 PNMA6FA0A0J9YX94 578 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 ESYT2A0FGR8 921 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 hCG_1984214I3L0E3 225 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 BMP1P13497 986 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 ELNP15502 786 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 HOXD10P28358 340 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 CASP1P29466 404 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 GNA11P29992 359 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 CLCN1P35523 988 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 AFMP43652 599 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 SNAP25P60880 206 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 UBE2SQ16763 222 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 LETM2Q2VYF4 491 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 SPDYE2Q495Y8 402 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 GPATCH4Q5T3I0 446 aaKnown RBP9.39□□□□□ -0.91
UBE4B-205ENST00000465408 CDAN1Q8IWY9 1227 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 ELOA2Q8IYF1 753 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-205ENST00000465408 FAM177A1Q8N128 213 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-205ENST00000465408 REXO1Q8N1G1 1221 aaKnown RBP9.39□□□□□ -0.91
UBE4B-205ENST00000465408 OGFOD1Q8N543 542 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 ZNF713Q8N859 430 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-205ENST00000465408 FAM151AQ8WW52 585 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 SMARCE1Q969G3 411 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 MKL1Q969V6 931 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 C11orf49Q9H6J7 331 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 HOOK1Q9UJC3 728 aaKnown RBP9.39□□□□□ -0.91
UBE4B-205ENST00000465408 EPG5Q9HCE0 2579 aa9.39□□□□□ -0.91
UBE4B-205ENST00000465408 PFASO15067 1338 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 OTOFQ9HC10 1997 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 PP2D1A8MPX8 630 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 PPP1R12BO60237 982 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-205ENST00000465408 CCNT1O60563 726 aaKnown RBP9.38□□□□□ -0.91
UBE4B-205ENST00000465408 NDUFB10O96000 172 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 BMP6P22004 513 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 PTGS1P23219 599 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 LONP1P36776 959 aaKnown RBP9.38□□□□□ -0.91
UBE4B-205ENST00000465408 SLC1A4P43007 532 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 TNNI2P48788 182 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 SMAD3P84022 425 aaKnown RBP9.38□□□□□ -0.91
UBE4B-205ENST00000465408 NCAPHQ15003 741 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 SHHQ15465 462 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 QRICH1Q2TAL8 776 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 PPP1R18Q6NYC8 613 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 SARM1Q6SZW1 724 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 C17orf99Q6UX52 265 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 SH3RF1Q7Z6J0 888 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 ANKLE1Q8NAG6 615 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 TBCKQ8TEA7 893 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 STAMQ92783 540 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 PAGE5Q96GU1 130 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 TMEM39BQ9GZU3 492 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 NRBP1Q9UHY1 535 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 CPA4Q9UI42 421 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 GABRQQ9UN88 632 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 REV3LO60673 3130 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 BAZ2BQ9UIF8 2168 aaKnown RBP9.38□□□□□ -0.91
UBE4B-205ENST00000465408 PSME4Q14997 1843 aa9.38□□□□□ -0.91
UBE4B-205ENST00000465408 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 KMT2BQ9UMN6 2715 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 A0A1W2PRG0 241 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 UNCXA6NJT0 531 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 SMTNL1A8MU46 457 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 GOLGA6L6A8MZA4 724 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 F5H6K3 240 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 ZBTB5O15062 677 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 SMC2O95347 1197 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 OR52Z1P0C646 297 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 SLFN14P0C7P3 912 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 TAL1P17542 331 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 CDC25AP30304 524 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 CDC25BP30305 580 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 SARSP49591 514 aaKnown RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 TPM4P67936 248 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 KLRC3Q07444 240 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 IKQ13123 557 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 MORC3Q14149 939 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 E2F4Q16254 413 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 CDC37Q16543 378 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 C9orf50Q5SZB4 431 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 ARL6IP4Q66PJ3 421 aaKnown RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 DTHD1Q6ZMT9 781 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 CCDC186Q7Z3E2 898 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 NEK8Q86SG6 692 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 APOBEC3FQ8IUX4 373 aaKnown RBP9.37□□□□□ -0.91
UBE4B-205ENST00000465408 ACER1Q8TDN7 264 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 MTMR8Q96EF0 704 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 PHOX2BQ99453 314 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 PLIN2Q99541 437 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 BLZF1Q9H2G9 400 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 RIC8AQ9NPQ8 531 aa9.37□□□□□ -0.91
UBE4B-205ENST00000465408 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms