RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 DNAJB2P25686 324 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 MRPL12P52815 198 aaKnown RBP17.29■□□□□ 0.36
MRPL55-225ENST00000465268 SP2Q02086 613 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 PGM5Q15124 567 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 FAM47CQ5HY64 1035 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 CATIPQ7Z7H3 387 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 ZNF654Q8IZM8 581 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 CMTR1Q8N1G2 835 aaKnown RBP17.29■□□□□ 0.36
MRPL55-225ENST00000465268 HERVK_113Q902F9 699 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 CTAGE1Q96RT6 745 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 SEZ6LQ9BYH1 1024 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 PBX4Q9BYU1 374 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 BCAS3Q9H6U6 928 aa17.29■□□□□ 0.36
MRPL55-225ENST00000465268 CHMP4BP1P59074 171 aa17.28■□□□□ 0.36
MRPL55-225ENST00000465268 GRIN2CQ14957 1233 aa17.28■□□□□ 0.36
MRPL55-225ENST00000465268 SART3Q15020 963 aaKnown RBP17.28■□□□□ 0.36
MRPL55-225ENST00000465268 PSRC1Q6PGN9 363 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-225ENST00000465268 OTOP2Q7RTS6 562 aa17.28■□□□□ 0.36
MRPL55-225ENST00000465268 VSIG10LQ86VR7 867 aa17.28■□□□□ 0.36
MRPL55-225ENST00000465268 FCHSD1Q86WN1 690 aa17.28■□□□□ 0.36
MRPL55-225ENST00000465268 UNC80Q8N2C7 3258 aa17.28■□□□□ 0.36
MRPL55-225ENST00000465268 GCOM1H8Y6P7 765 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-225ENST00000465268 FGBP02675 491 aa17.27■□□□□ 0.36
MRPL55-225ENST00000465268 POLR2MP0CAP2 368 aa17.27■□□□□ 0.36
MRPL55-225ENST00000465268 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-225ENST00000465268 BMP2KLQ5H9B9 411 aa17.27■□□□□ 0.36
MRPL55-225ENST00000465268 NFRKBQ6P4R8 1299 aa17.27■□□□□ 0.36
MRPL55-225ENST00000465268 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-225ENST00000465268 SRBD1Q8N5C6 995 aaKnown RBP17.27■□□□□ 0.36
MRPL55-225ENST00000465268 ANO2Q9NQ90 1003 aa17.27■□□□□ 0.36
MRPL55-225ENST00000465268 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
MRPL55-225ENST00000465268 KPNA6O60684 536 aa17.26■□□□□ 0.35
MRPL55-225ENST00000465268 DDAH1O94760 285 aa17.26■□□□□ 0.35
MRPL55-225ENST00000465268 GDF6Q6KF10 455 aaPredicted RBP17.26■□□□□ 0.35
MRPL55-225ENST00000465268 CASC1Q6TDU7 716 aa17.26■□□□□ 0.35
MRPL55-225ENST00000465268 TIFAQ96CG3 184 aa17.26■□□□□ 0.35
MRPL55-225ENST00000465268 MAP3K20Q9NYL2 800 aaKnown RBP17.26■□□□□ 0.35
MRPL55-225ENST00000465268 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 ZNF286BP0CG31 522 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 MCM5P33992 734 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 MRPS9P82933 396 aaKnown RBP17.25■□□□□ 0.35
MRPL55-225ENST00000465268 HIC1Q14526 733 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 GPNMBQ14956 572 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 USP17L6PQ6QN14 398 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 DEFB128Q7Z7B8 93 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 DHX38Q92620 1227 aaKnown RBP17.25■□□□□ 0.35
MRPL55-225ENST00000465268 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
MRPL55-225ENST00000465268 MAP3K14Q99558 947 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 SPZ1Q9BXG8 430 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
MRPL55-225ENST00000465268 TELO2Q9Y4R8 837 aa17.25■□□□□ 0.35
MRPL55-225ENST00000465268 UBA1P22314 1058 aaKnown RBP17.24■□□□□ 0.35
MRPL55-225ENST00000465268 RABGGTBP53611 331 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 SEMA3FQ13275 785 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 LAMC2Q13753 1193 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 HSDL1Q3SXM5 330 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 CELF3Q5SZQ8 465 aaKnown RBP17.24■□□□□ 0.35
MRPL55-225ENST00000465268 MYSM1Q5VVJ2 828 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 DHX37Q8IY37 1157 aaKnown RBP17.24■□□□□ 0.35
MRPL55-225ENST00000465268 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 SAMD3Q8N6K7 520 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 PPTC7Q8NI37 304 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 CTCFLQ8NI51 663 aaPredicted RBP17.24■□□□□ 0.35
MRPL55-225ENST00000465268 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 TCEANC2Q96MN5 208 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 ZNF576Q9H609 170 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 HDAC6Q9UBN7 1215 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 PRUNE2Q8WUY3 3088 aa17.24■□□□□ 0.35
MRPL55-225ENST00000465268 SCN10AQ9Y5Y9 1956 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 TMEM265A0A087WTH1 108 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 MEIS2O14770 477 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 GGPS1O95749 300 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 IQCF3P0C7M6 154 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 MYOGP15173 224 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 CASTP20810 708 aaKnown RBP17.23■□□□□ 0.35
MRPL55-225ENST00000465268 PSEN2P49810 448 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 ZNF200P98182 395 aaPredicted RBP17.23■□□□□ 0.35
MRPL55-225ENST00000465268 PTPN11Q06124 597 aaPredicted RBP17.23■□□□□ 0.35
MRPL55-225ENST00000465268 PTGISQ16647 500 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 DGKDQ16760 1214 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 ADCK5Q3MIX3 580 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 MAFAQ8NHW3 353 aaPredicted RBP17.23■□□□□ 0.35
MRPL55-225ENST00000465268 WNT8BQ93098 351 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 ALG1Q9BT22 464 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 MTA3Q9BTC8 594 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 RTEL1Q9NZ71 1219 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 CHD9Q3L8U1 2897 aa17.23■□□□□ 0.35
MRPL55-225ENST00000465268 FRMPD4Q14CM0 1322 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 CCDC69A6NI79 296 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 HAS3O00219 553 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 F2P00734 622 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 HOXD8P13378 290 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-225ENST00000465268 CCND2P30279 289 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 LIFRP42702 1097 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 CCDC82Q8N4S0 544 aa17.22■□□□□ 0.35
MRPL55-225ENST00000465268 RRP36Q96EU6 259 aaKnown RBP17.22■□□□□ 0.35
MRPL55-225ENST00000465268 SPATA33Q96N06 139 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms