RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 RCOR1Q9UKL0 485 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 ZNFX1Q9P2E3 1918 aaKnown RBP19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 NR3C2P08235 984 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 CYP3A4P08684 503 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 NASPP49321 788 aaPredicted RBP19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 LETM2Q2VYF4 491 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 SOCS4Q8WXH5 440 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 IWS1Q96ST2 819 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 PANK2Q9BZ23 570 aa19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 NOL7Q9UMY1 257 aaKnown RBP19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 DIS3Q9Y2L1 958 aaKnown RBP19.22■□□□□ 0.67
EXOSC3-203ENST00000465229 HOXC6P09630 235 aa19.21■□□□□ 0.67
EXOSC3-203ENST00000465229 EDNRBP24530 442 aa19.21■□□□□ 0.67
EXOSC3-203ENST00000465229 PCNX4Q63HM2 1172 aa19.21■□□□□ 0.67
EXOSC3-203ENST00000465229 NPLOC4Q8TAT6 608 aa19.21■□□□□ 0.67
EXOSC3-203ENST00000465229 ERO1AQ96HE7 468 aa19.21■□□□□ 0.67
EXOSC3-203ENST00000465229 TFIP11Q9UBB9 837 aaKnown RBP19.21■□□□□ 0.67
EXOSC3-203ENST00000465229 RBBP6Q7Z6E9 1792 aaKnown RBP19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 GOLGA6L4A6NEF3 574 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 CIITAP33076 1130 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 MRPS9P82933 396 aaKnown RBP19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 TTC38Q5R3I4 469 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 MAML3Q96JK9 1138 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 ZFP91Q96JP5 570 aaPredicted RBP19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 TSPY26PQ9H489 355 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 SLC5A4Q9NY91 659 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 GABRQQ9UN88 632 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 PLXNB2O15031 1838 aa19.2■□□□□ 0.66
EXOSC3-203ENST00000465229 LCTP09848 1927 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 CYP3A7-CYP3A51PA0A087WV96 503 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 CCNT1O60563 726 aaKnown RBP19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 MYCLP12524 364 aaPredicted RBP19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 CYP2B6P20813 491 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 CYP3A7P24462 503 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 RGS2P41220 211 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 ZNF174Q15697 407 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 PPP4R3AQ6IN85 833 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 XRRA1Q6P2D8 792 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 ZNF467Q7Z7K2 595 aaPredicted RBP19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 CYP2W1Q8TAV3 490 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 USP28Q96RU2 1077 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 FTOQ9C0B1 505 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■□□□□ 8.2
EXOSC3-203ENST00000465229 RBSNQ9H1K0 784 aa19.19■□□□□ 0.66
EXOSC3-203ENST00000465229 LOC102724159A0A0B4J2E5 919 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 FAM86B1E9PN63 330 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 TDP2O95551 362 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 FAM86B2P0C5J1 330 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 CCND2P30279 289 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 FLT3LGP49771 235 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 PRKCZQ05513 592 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 PWP2Q15269 919 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 MORC4Q8TE76 937 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 RTEL1Q9NZ71 1219 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 CLIC4Q9Y696 253 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 MYH7BA7E2Y1 1941 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 ASB14A6NK59 587 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 GNRH1P01148 92 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 ITGB5P18084 799 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 MCM7P33993 719 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 ZNF76P36508 570 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 STXBP2Q15833 593 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 CEP55Q53EZ4 464 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 MOXD1Q6UVY6 613 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 MAMDC4Q6UXC1 1216 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 MBOAT7Q96N66 472 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 APBA2Q99767 749 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 DDX19AQ9NUU7 478 aaKnown RBP19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 SRRDQ9UH36 339 aa19.18■□□□□ 0.66
EXOSC3-203ENST00000465229 ZSWIM8A7E2V4 1837 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 B4DLN1 442 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 XRCC5P13010 732 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 GCFC2P16383 781 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 HOXD10P28358 340 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 CEBPZQ03701 1054 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 PDE4DQ08499 809 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 SF3A1Q15459 793 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 CCL14Q16627 93 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 ANO1Q5XXA6 986 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 NAP1L4Q99733 375 aaKnown RBP19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 MXRA8Q9BRK3 442 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 FLRT1Q9NZU1 646 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 UBIAD1Q9Y5Z9 338 aa19.17■□□□□ 0.66
EXOSC3-203ENST00000465229 MGAMO43451 1857 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 ZNF236Q9UL36 1845 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 IGLV3-22A0A075B6J6 115 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 MEIS1O00470 390 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 FOXN1O15353 648 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 SLC37A4O43826 429 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 EIF3JO75822 258 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 RGS20O76081 388 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 CCDC173Q0VFZ6 552 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 ARHGEF6Q15052 776 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 Q4G0T1 1027 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 PRR16Q569H4 304 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 ARMCX2Q7L311 632 aa19.16■□□□□ 0.66
EXOSC3-203ENST00000465229 LENG9Q96B70 501 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms