RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 DDX1Q92499 740 aaKnown RBP6.37□□□□□ -1.39
VPS8-217ENST00000465213 MRGPRX3Q96LB0 322 aa6.37□□□□□ -1.39
VPS8-217ENST00000465213 KRTAP3-1Q9BYR8 98 aa6.37□□□□□ -1.39
VPS8-217ENST00000465213 BACE2Q9Y5Z0 518 aa6.37□□□□□ -1.39
VPS8-217ENST00000465213 PPP1R11O60927 126 aaPredicted RBP6.36□□□□□ -1.39
VPS8-217ENST00000465213 GJB6O95452 261 aa6.36□□□□□ -1.39
VPS8-217ENST00000465213 ANKS3Q6ZW76 656 aa6.36□□□□□ -1.39
VPS8-217ENST00000465213 TRIM59Q8IWR1 403 aa6.36□□□□□ -1.39
VPS8-217ENST00000465213 C1QTNF3Q9BXJ4 246 aa6.36□□□□□ -1.39
VPS8-217ENST00000465213 BCAS3Q9H6U6 928 aa6.36□□□□□ -1.39
VPS8-217ENST00000465213 RXFP1Q9HBX9 757 aa6.36□□□□□ -1.39
VPS8-217ENST00000465213 RWDD3Q9Y3V2 267 aa6.36□□□□□ -1.39
VPS8-217ENST00000465213 NOP56O00567 594 aaKnown RBP6.35□□□□□ -1.39
VPS8-217ENST00000465213 SUSD5O60279 629 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 SEPHS1P49903 392 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 CYP4F3Q08477 520 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 WWC2Q6AWC2 1192 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 GTF2IRD2BQ6EKJ0 949 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 POMZP3Q6PJE2 187 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 TTLL7Q6ZT98 887 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 GTF2IRD2Q86UP8 949 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 COPS5Q92905 334 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 SAMD11Q96NU1 681 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 ST7Q9NRC1 585 aa6.35□□□□□ -1.39
VPS8-217ENST00000465213 TRBV23OR9-2A0A075B6M9 112 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 TBX1O43435 398 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 ITGAVP06756 1048 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 SV2CQ496J9 727 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 CRACR2BQ8N4Y2 399 aaPredicted RBP6.34□□□□□ -1.39
VPS8-217ENST00000465213 ADAMTS17Q8TE56 1095 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 PCDH18Q9HCL0 1135 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 GPRC5CQ9NQ84 441 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 CYP26B1Q9NR63 512 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS8-217ENST00000465213 USP35Q9P2H5 1018 aa6.34□□□□□ -1.39
VPS8-217ENST00000465213 MATN3O15232 486 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 PLATP00750 562 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 SCRN1Q12765 414 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 DDR2Q16832 855 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 CPZQ66K79 652 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 ZNF227Q86WZ6 799 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 CPNE8Q86YQ8 564 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 BTN2A2Q8WVV5 523 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 ZBTB8AQ96BR9 441 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 C8orf37Q96NL8 207 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 NKX2-4Q9H2Z4 354 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 GULP1Q9UBP9 304 aa6.33□□□□□ -1.4
VPS8-217ENST00000465213 R3HCC1Q9Y3T6 440 aaKnown RBP6.33□□□□□ -1.4
VPS8-217ENST00000465213 AKAP8O43823 692 aaKnown RBP6.32□□□□□ -1.4
VPS8-217ENST00000465213 CAPNS1P04632 268 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 C8BP07358 591 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 CYP2C8P10632 490 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 PLS3P13797 630 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 PAMP19021 973 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 RPL13P26373 211 aaKnown RBP6.32□□□□□ -1.4
VPS8-217ENST00000465213 THBS2P35442 1172 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 ZXDAP98168 799 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 TBC1D10BQ4KMP7 808 aaPredicted RBP6.32□□□□□ -1.4
VPS8-217ENST00000465213 EEPD1Q7L9B9 569 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 GORASP1Q9BQQ3 440 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 CLEC1BQ9P126 229 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 LRP2BPQ9P2M1 347 aa6.32□□□□□ -1.4
VPS8-217ENST00000465213 NPHP3-ACAD11A0A0J9YXS1 232 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 C7orf72A4D263 438 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 SMARCA5O60264 1052 aaPredicted RBP6.31□□□□□ -1.4
VPS8-217ENST00000465213 THBDP07204 575 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 ZNF20P17024 532 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
VPS8-217ENST00000465213 RAB33AQ14088 237 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 SF1Q15637 639 aaKnown RBP6.31□□□□□ -1.4
VPS8-217ENST00000465213 SLC10A6Q3KNW5 377 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 FAM26FQ5R3K3 315 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 MBLAC2Q68D91 279 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 MIB1Q86YT6 1006 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 FRS2Q8WU20 508 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 C11orf84Q9BUA3 381 aaPredicted RBP6.31□□□□□ -1.4
VPS8-217ENST00000465213 EPN3Q9H201 632 aa6.31□□□□□ -1.4
VPS8-217ENST00000465213 ARNTLO00327 626 aa6.3□□□□□ -1.4
VPS8-217ENST00000465213 NPHS1O60500 1241 aa6.3□□□□□ -1.4
VPS8-217ENST00000465213 STK10O94804 968 aaKnown RBP6.3□□□□□ -1.4
VPS8-217ENST00000465213 SMAD4Q13485 552 aaKnown RBP6.3□□□□□ -1.4
VPS8-217ENST00000465213 DCP2Q8IU60 420 aaKnown RBP6.3□□□□□ -1.4
VPS8-217ENST00000465213 NPLOC4Q8TAT6 608 aa6.3□□□□□ -1.4
VPS8-217ENST00000465213 PLEKHO2Q8TD55 490 aa6.3□□□□□ -1.4
VPS8-217ENST00000465213 MMP19Q99542 508 aa6.3□□□□□ -1.4
VPS8-217ENST00000465213 SSBP3Q9BWW4 388 aaPredicted RBP6.3□□□□□ -1.4
VPS8-217ENST00000465213 TANGO6Q9C0B7 1094 aa6.3□□□□□ -1.4
VPS8-217ENST00000465213 NTRK1P04629 796 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 SCG5P05408 212 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 HOXC12P31275 282 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 KIAA2012Q0VF49 1180 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 RGL3Q3MIN7 710 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 ETV3LQ6ZN32 361 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 LGI4Q8N135 537 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 KYQ8NBH2 561 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 KREMEN2Q8NCW0 462 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 DPF3Q92784 378 aa6.29□□□□□ -1.4
VPS8-217ENST00000465213 A0A1W2PQU0 124 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms