RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 TDHQ8IZJ6 230 aa14.07□□□□□ -0.16
XRN1-204ENST00000465074 IL31RAQ8NI17 732 aa14.07□□□□□ -0.16
XRN1-204ENST00000465074 MAF1Q9H063 256 aa14.07□□□□□ -0.16
XRN1-204ENST00000465074 POLR3EQ9NVU0 708 aa14.07□□□□□ -0.16
XRN1-204ENST00000465074 MRVI1Q9Y6F6 885 aa14.07□□□□□ -0.16
XRN1-204ENST00000465074 MROH7Q68CQ1 1323 aa14.07□□□□□ -0.16
XRN1-204ENST00000465074 RANBP2P49792 3224 aaKnown RBP14.06□□□□□ -0.16
XRN1-204ENST00000465074 A0A1W2PPC1 479 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 GH1P01241 217 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 CASTP20810 708 aaKnown RBP14.06□□□□□ -0.16
XRN1-204ENST00000465074 SMARCA1P28370 1054 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 CDK7P50613 346 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 PGM5Q15124 567 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 TMTC3Q6ZXV5 915 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 ANKRD33Q7Z3H0 272 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 AFG1LQ8WV93 481 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 GPKOWQ92917 476 aaPredicted RBP eCLIP14.06□□□□□ -0.16
XRN1-204ENST00000465074 BRF1Q92994 677 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 PDCD2LQ9BRP1 358 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 PPP1R12CQ9BZL4 782 aa14.06□□□□□ -0.16
XRN1-204ENST00000465074 RBM28Q9NW13 759 aaKnown RBP14.06□□□□□ -0.16
XRN1-204ENST00000465074 MAP3K20Q9NYL2 800 aaKnown RBP14.06□□□□□ -0.16
XRN1-204ENST00000465074 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
XRN1-204ENST00000465074 SLC34A2O95436 690 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 ITGB8P26012 769 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 NKX3-2P78367 333 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 CCDC62Q6P9F0 684 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 DHX37Q8IY37 1157 aaKnown RBP14.05□□□□□ -0.16
XRN1-204ENST00000465074 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 TOX2Q96NM4 488 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 MTG1Q9BT17 334 aaPredicted RBP14.05□□□□□ -0.16
XRN1-204ENST00000465074 TRPV6Q9H1D0 765 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 PSTPIP2Q9H939 334 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 RTEL1Q9NZ71 1219 aa14.05□□□□□ -0.16
XRN1-204ENST00000465074 V9GY48 417 aaPredicted RBP14.05□□□□□ -0.16
XRN1-204ENST00000465074 KIAA0355O15063 1070 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 RPS6KB1P23443 525 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 PSMA5P28066 241 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 PURAQ00577 322 aaKnown RBP14.04□□□□□ -0.16
XRN1-204ENST00000465074 SHHQ15465 462 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 UBE2SQ16763 222 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 VSIG10LQ86VR7 867 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 FAM126BQ8IXS8 530 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 SAMD3Q8N6K7 520 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 DDX41Q9UJV9 622 aaKnown RBP14.04□□□□□ -0.16
XRN1-204ENST00000465074 GRIN2DO15399 1336 aa14.04□□□□□ -0.16
XRN1-204ENST00000465074 A6NJR5 290 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 KPNA6O60684 536 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 TIMP1P01033 207 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 CDC27P30260 824 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 CYP2C18P33260 490 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 METAP2P50579 478 aaKnown RBP eCLIP14.03□□□□□ -0.16
XRN1-204ENST00000465074 NAPAP54920 295 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 GHRHRQ02643 423 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 FPGSQ05932 587 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 ARHGAP1Q07960 439 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 NBPF20Q3BBV1 942 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 C9orf50Q5SZB4 431 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 KCNB2Q92953 911 aa14.03□□□□□ -0.16
XRN1-204ENST00000465074 DOCK5Q9H7D0 1870 aa14.02□□□□□ -0.16
XRN1-204ENST00000465074 CNTNAP5Q8WYK1 1306 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 SPDYE3A6NKU9 549 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 B4GALT4O60513 344 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 PPFIA3O75145 1194 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 GGPS1O95749 300 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 MMP3P08254 477 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 KCNA4P22459 653 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 ADD1P35611 737 aaKnown RBP14.02□□□□□ -0.17
XRN1-204ENST00000465074 LAMC2Q13753 1193 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 LARP6Q9BRS8 491 aaKnown RBP14.02□□□□□ -0.17
XRN1-204ENST00000465074 USP26Q9BXU7 913 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 MLXIPQ9HAP2 919 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 TRMT13Q9NUP7 481 aaKnown RBP14.02□□□□□ -0.17
XRN1-204ENST00000465074 TBX21Q9UL17 535 aa14.02□□□□□ -0.17
XRN1-204ENST00000465074 MEIS2O14770 477 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 RGS20O76081 388 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 CD4P01730 458 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 ZNF286BP0CG31 522 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 CYP2C9P11712 490 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 EPHB4P54760 987 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 CCL23P55773 120 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 CCT2P78371 535 aaKnown RBP14.01□□□□□ -0.17
XRN1-204ENST00000465074 SP2Q02086 613 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 DGKDQ16760 1214 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 GNPTABQ3T906 1256 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 WWC2Q6AWC2 1192 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 KCNV1Q6PIU1 500 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 RUFY3Q7L099 469 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 SLC43A3Q8NBI5 491 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 SPATA33Q96N06 139 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 ALG1Q9BT22 464 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 ALDH8A1Q9H2A2 487 aaPredicted RBP14.01□□□□□ -0.17
XRN1-204ENST00000465074 HIPK3Q9H422 1215 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 NOD1Q9Y239 953 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 CYP46A1Q9Y6A2 500 aa14.01□□□□□ -0.17
XRN1-204ENST00000465074 CCDC196A0A1B0GTZ2 297 aa14□□□□□ -0.17
XRN1-204ENST00000465074 ACRP10323 421 aa14□□□□□ -0.17
XRN1-204ENST00000465074 CSF2RAP15509 400 aa14□□□□□ -0.17
XRN1-204ENST00000465074 MRPS9P82933 396 aaKnown RBP14□□□□□ -0.17
XRN1-204ENST00000465074 AKAP17AQ02040 695 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms