RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 PPP2R2AP63151 447 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 SUMO1P63165 101 aaKnown RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 ZNF648Q5T619 568 aaPredicted RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 YOD1Q5VVQ6 348 aaPredicted RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 SLC6A19Q695T7 634 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 ZNF765Q7L2R6 523 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 WDR75Q8IWA0 830 aaKnown RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 MRPL41Q8IXM3 137 aaKnown RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 PPM1KQ8N3J5 372 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 MFSD2AQ8NA29 543 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 LRRN4CLQ8ND94 238 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 TSR2Q969E8 191 aaKnown RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 SLC6A18Q96N87 628 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 PRDM10Q9NQV6 1147 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 RGS17Q9UGC6 210 aaPredicted RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 SUSD2Q9UGT4 822 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 JCADQ9P266 1359 aa7.94□□□□□ -1.14
KPNA1-202ENST00000464940 RRBP1Q9P2E9 1410 aaKnown RBP7.94□□□□□ -1.14
KPNA1-202ENST00000464940 CLTCL1P53675 1640 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 DBX1A6NMT0 343 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 TSPAN6O43657 245 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 RASGRP1O95267 797 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 FGFR1P11362 822 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 NKG7Q16617 165 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 FBLN7Q53RD9 439 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 TMEM192Q8IY95 271 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 LEO1Q8WVC0 666 aaPredicted RBP7.93□□□□□ -1.14
KPNA1-202ENST00000464940 PMM1Q92871 262 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 SMARCC1Q92922 1105 aaPredicted RBP7.93□□□□□ -1.14
KPNA1-202ENST00000464940 PPP1R14AQ96A00 147 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 TMEM87BQ96K49 555 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 CCDC74BQ96LY2 380 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 TJP2Q9UDY2 1190 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 NEXMIFQ5QGS0 1516 aa7.93□□□□□ -1.14
KPNA1-202ENST00000464940 NHSL1Q5SYE7 1610 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 BIN1O00499 593 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 LEFTY1O75610 366 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 EYA4O95677 639 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 CST3P01034 146 aaPredicted RBP7.92□□□□□ -1.14
KPNA1-202ENST00000464940 ITGAVP06756 1048 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 EPHX1P07099 455 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 GBP1P32455 592 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 PPP2R5AQ15172 486 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 CCSAPQ6IQ19 270 aaPredicted RBP7.92□□□□□ -1.14
KPNA1-202ENST00000464940 NSMFQ6X4W1 530 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 ARMCX6Q7L4S7 300 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 FAM214BQ7L5A3 538 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 STRA8Q7Z7C7 330 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 SMC5Q8IY18 1101 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 HAUS7Q99871 368 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 C19orf44Q9H6X5 657 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 FAM86C1Q9NVL1 165 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 ZC3H7BQ9UGR2 993 aaKnown RBP7.92□□□□□ -1.14
KPNA1-202ENST00000464940 PTPRUQ92729 1446 aa7.92□□□□□ -1.14
KPNA1-202ENST00000464940 SETD1AO15047 1707 aaKnown RBP7.92□□□□□ -1.14
KPNA1-202ENST00000464940 PRODHO43272 600 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 NPTXRO95502 500 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 PABPC1P11940 636 aaKnown RBP7.91□□□□□ -1.14
KPNA1-202ENST00000464940 ATF3P18847 181 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 TDRD10Q5VZ19 366 aaKnown RBP7.91□□□□□ -1.14
KPNA1-202ENST00000464940 NECAB2Q7Z6G3 386 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 PPFIBP1Q86W92 1011 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 SFMBT1Q9UHJ3 866 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 SPATA31A6Q5VVP1 1343 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 NALCNQ8IZF0 1738 aa7.91□□□□□ -1.14
KPNA1-202ENST00000464940 ASXL1Q8IXJ9 1541 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 NAIPQ13075 1403 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 KATNA1O75449 491 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 CLEC3AO75596 197 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 EIF3JO75822 258 aaKnown RBP7.9□□□□□ -1.14
KPNA1-202ENST00000464940 BIRC2Q13490 618 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 ZNF124Q15973 351 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 TRIM61Q5EBN2 209 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 RNF219Q5W0B1 726 aaPredicted RBP7.9□□□□□ -1.14
KPNA1-202ENST00000464940 ADAT2Q7Z6V5 191 aaKnown RBP7.9□□□□□ -1.14
KPNA1-202ENST00000464940 ZNF227Q86WZ6 799 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 TOP6BLQ8N6T0 577 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 WDR66Q8TBY9 1149 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 KLHL25Q9H0H3 589 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.9□□□□□ -1.149e-6■■□□□ 11.4
KPNA1-202ENST00000464940 GBP3Q9H0R5 595 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 LRRC4CQ9HCJ2 640 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 SLC5A4Q9NY91 659 aa7.9□□□□□ -1.14
KPNA1-202ENST00000464940 LRP6O75581 1613 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 C9IYK1 514 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 IGF2BP3O00425 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
KPNA1-202ENST00000464940 NOP56O00567 594 aaKnown RBP7.89□□□□□ -1.15
KPNA1-202ENST00000464940 CAND2O75155 1236 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 UBOX5O94941 541 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 EOMESO95936 686 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 POU3F2P20265 443 aaPredicted RBP7.89□□□□□ -1.15
KPNA1-202ENST00000464940 RHBDL3P58872 404 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 MCL1Q07820 350 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 STRN3Q13033 797 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 PRAMEF13Q5VWM6 474 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 SPOCD1Q6ZMY3 1216 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 CCDC144CPQ8IYA2 1237 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 OSBP2Q969R2 916 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 FGD4Q96M96 766 aa7.89□□□□□ -1.15
KPNA1-202ENST00000464940 HEXIM2Q96MH2 286 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms