RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 AP5M1Q9H0R1 490 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 FBXL7Q9UJT9 491 aa8.86□□□□□ -0.99
PTCD3-205ENST00000464541 KCNQ2O43526 872 aa8.85□□□□□ -0.99
PTCD3-205ENST00000464541 DGKIO75912 1065 aa8.85□□□□□ -0.99
PTCD3-205ENST00000464541 APPP05067 770 aa8.85□□□□□ -0.99
PTCD3-205ENST00000464541 TMEM132EQ6IEE7 984 aa8.85□□□□□ -0.99
PTCD3-205ENST00000464541 TMC6Q7Z403 805 aa8.85□□□□□ -0.99
PTCD3-205ENST00000464541 ZC3H12DA2A288 527 aaKnown RBP8.84□□□□□ -0.99
PTCD3-205ENST00000464541 PLD2O14939 933 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 MED14OSP0DP75 135 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 GRK2P25098 689 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 GRK3P35626 688 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 PRR5P85299 388 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 SYDE1Q6ZW31 735 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-205ENST00000464541 ASXL2Q76L83 1435 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 HOMER1Q86YM7 354 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 GSTCDQ8NEC7 633 aa8.84□□□□□ -0.99
PTCD3-205ENST00000464541 NCOA5Q9HCD5 579 aaKnown RBP8.84□□□□□ -0.99
PTCD3-205ENST00000464541 MBD1Q9UIS9 605 aaPredicted RBP8.84□□□□□ -0.99
PTCD3-205ENST00000464541 WNT9AO14904 365 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 TSPAN15O95858 294 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 TMEM253P0C7T8 217 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 EMC4Q5J8M3 183 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 CYP4F22Q6NT55 531 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 KCNN1Q92952 543 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 RNF38Q9H0F5 515 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 SFMBT1Q9UHJ3 866 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 TRAF6Q9Y4K3 522 aa8.83□□□□□ -1
PTCD3-205ENST00000464541 FAM47E-STBD1D6RA91 191 aa8.82□□□□□ -1
PTCD3-205ENST00000464541 MAFKO60675 156 aa8.82□□□□□ -1
PTCD3-205ENST00000464541 PAK1Q13153 545 aa8.82□□□□□ -1
PTCD3-205ENST00000464541 TARBP2Q15633 366 aaKnown RBP8.82□□□□□ -1
PTCD3-205ENST00000464541 PKN1Q16512 942 aa8.82□□□□□ -1
PTCD3-205ENST00000464541 FNDC3BQ53EP0 1204 aaKnown RBP8.82□□□□□ -1
PTCD3-205ENST00000464541 MTDHQ86UE4 582 aaKnown RBP8.82□□□□□ -1
PTCD3-205ENST00000464541 APPBP2Q92624 585 aa8.82□□□□□ -1
PTCD3-205ENST00000464541 CNTD2Q9H8S5 307 aa8.82□□□□□ -1
PTCD3-205ENST00000464541 ZNF652Q9Y2D9 606 aa8.82□□□□□ -1
PTCD3-205ENST00000464541 IRS2Q9Y4H2 1338 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 ARVCFO00192 962 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 NFIBO00712 420 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 SOD2P04179 222 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 DLG4P78352 724 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 ZNF648Q5T619 568 aaPredicted RBP8.81□□□□□ -1
PTCD3-205ENST00000464541 JAZF1Q86VZ6 243 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.81□□□□□ -1
PTCD3-205ENST00000464541 KANSL2Q9H9L4 492 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 SLC52A2Q9HAB3 445 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 NDOR1Q9UHB4 597 aa8.81□□□□□ -1
PTCD3-205ENST00000464541 ESYT3A0FGR9 886 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 ETV2O00321 342 aaPredicted RBP8.8□□□□□ -1
PTCD3-205ENST00000464541 KRIT1O00522 736 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 HGSO14964 777 aaPredicted RBP8.8□□□□□ -1
PTCD3-205ENST00000464541 N4BP3O15049 544 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 GUCY1A3Q02108 690 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 SPIRE1Q08AE8 756 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 TCEA2Q15560 299 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 LDHDQ86WU2 507 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 PHOSPHO1Q8TCT1 267 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 PANK1Q8TE04 598 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 MZB1Q8WU39 189 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 KCNK12Q9HB15 430 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 GCM1Q9NP62 436 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 TBX22Q9Y458 520 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 NUB1Q9Y5A7 615 aa8.8□□□□□ -1
PTCD3-205ENST00000464541 MRPL42Q9Y6G3 142 aaKnown RBP8.8□□□□□ -1
PTCD3-205ENST00000464541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.79□□□□□ -1
PTCD3-205ENST00000464541 SGSM2O43147 1006 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 IGSF3O75054 1194 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 RFPL3O75679 317 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 PFKLP17858 780 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 FBLN1P23142 703 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 ZNF200P98182 395 aaPredicted RBP8.79□□□□□ -1
PTCD3-205ENST00000464541 STEAP3Q658P3 488 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 C16orf86Q6ZW13 317 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 SLC7A14Q8TBB6 771 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 CPA5Q8WXQ8 436 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 ALG3Q92685 438 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 MAGEB10Q96LZ2 347 aaPredicted RBP8.79□□□□□ -1
PTCD3-205ENST00000464541 SLC6A20Q9NP91 592 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 TMA7Q9Y2S6 64 aaKnown RBP8.79□□□□□ -1
PTCD3-205ENST00000464541 PCDHA5Q9Y5H7 936 aa8.79□□□□□ -1
PTCD3-205ENST00000464541 TLDC2A0PJX2 215 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 TCAF2A6NFQ2 919 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 ENPP3O14638 875 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 GSTA4O15217 222 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 TADA3O75528 432 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 CRTAMO95727 393 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 CDR1P51861 262 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 HABP4Q5JVS0 413 aaKnown RBP8.78□□□□□ -1
PTCD3-205ENST00000464541 OTOP3Q7RTS5 596 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 JAM3Q9BX67 310 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 SMOC1Q9H4F8 434 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 IPPKQ9H8X2 491 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 RXFP1Q9HBX9 757 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 PPARGC1AQ9UBK2 798 aaKnown RBP8.78□□□□□ -1
PTCD3-205ENST00000464541 PALD1Q9ULE6 856 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 HCFC2Q9Y5Z7 792 aa8.78□□□□□ -1
PTCD3-205ENST00000464541 CDC45O75419 566 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms