RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SLC26A6Q9BXS9 759 aa19.58■□□□□ 0.72
VPS52-215ENST00000464425 CEP290O15078 2479 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 MOXD2PA6NHM9 499 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 PRPF3O43395 683 aaKnown RBP19.57■□□□□ 0.72
VPS52-215ENST00000464425 RTP1P59025 263 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 NKX3-2P78367 333 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 AKAP17AQ02040 695 aaKnown RBP19.57■□□□□ 0.72
VPS52-215ENST00000464425 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
VPS52-215ENST00000464425 LY6KQ17RY6 165 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 BARHL2Q9NY43 387 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 TPCN1Q9ULQ1 816 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 ATP11BQ9Y2G3 1177 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 DNAH12Q6ZR08 3092 aa19.57■□□□□ 0.72
VPS52-215ENST00000464425 SMCO2A6NFE2 343 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 CPLX1O14810 134 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 SCG2P13521 617 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 IFNAR1P17181 557 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 AK2P54819 239 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 PKN1Q16512 942 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 CCDC62Q6P9F0 684 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 STARD7Q9NQZ5 370 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 RTEL1Q9NZ71 1219 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 PCDH10Q9P2E7 1040 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 ZMYND8Q9ULU4 1186 aaPredicted RBP19.56■□□□□ 0.72
VPS52-215ENST00000464425 MRVI1Q9Y6F6 885 aa19.56■□□□□ 0.72
VPS52-215ENST00000464425 ALPK3Q96L96 1907 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 NKRFO15226 690 aaKnown RBP eCLIP19.55■□□□□ 0.72
VPS52-215ENST00000464425 ZEB2O60315 1214 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 RGS20O76081 388 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 SYN1P17600 705 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 ADCY7P51828 1080 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 TRIM60Q495X7 471 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 PPP1R18Q6NYC8 613 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 CXCL17Q6UXB2 119 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 GLT1D1Q96MS3 346 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 SLKQ9H2G2 1235 aaPredicted RBP19.55■□□□□ 0.72
VPS52-215ENST00000464425 RIC8AQ9NPQ8 531 aa19.55■□□□□ 0.72
VPS52-215ENST00000464425 DDX41Q9UJV9 622 aaKnown RBP19.55■□□□□ 0.72
VPS52-215ENST00000464425 SPDYE3A6NKU9 549 aa19.54■□□□□ 0.72
VPS52-215ENST00000464425 hCG_1984214I3L0E3 225 aa19.54■□□□□ 0.72
VPS52-215ENST00000464425 MRPS9P82933 396 aaKnown RBP19.54■□□□□ 0.72
VPS52-215ENST00000464425 SSRP1Q08945 709 aaKnown RBP19.54■□□□□ 0.72
VPS52-215ENST00000464425 SCRN1Q12765 414 aa19.54■□□□□ 0.72
VPS52-215ENST00000464425 ZNF713Q8N859 430 aaPredicted RBP19.54■□□□□ 0.72
VPS52-215ENST00000464425 RNF26Q9BY78 433 aaPredicted RBP19.54■□□□□ 0.72
VPS52-215ENST00000464425 RBM27Q9P2N5 1060 aaKnown RBP19.54■□□□□ 0.72
VPS52-215ENST00000464425 PCDHA6Q9UN73 950 aa19.54■□□□□ 0.72
VPS52-215ENST00000464425 PCDHA8Q9Y5H6 950 aa19.54■□□□□ 0.72
VPS52-215ENST00000464425 FRMPD4Q14CM0 1322 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 ST18O60284 1047 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 SORBS3O60504 671 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 GH1P01241 217 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 MYL3P08590 195 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 SNX17Q15036 470 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 TRIM22Q8IYM9 498 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 PGBD1Q96JS3 809 aa19.53■□□□□ 0.72
VPS52-215ENST00000464425 ELP1O95163 1332 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 PFKFB2O60825 505 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 PQBP1O60828 265 aaKnown RBP19.52■□□□□ 0.72
VPS52-215ENST00000464425 DTNBO60941 627 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 CPT1AP50416 773 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 TLE2Q04725 743 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 C1orf53Q5VUE5 145 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 PCNX4Q63HM2 1172 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 CPLX2Q6PUV4 134 aaKnown RBP19.52■□□□□ 0.72
VPS52-215ENST00000464425 NECAB1Q8N987 351 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 AFG1LQ8WV93 481 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 TMEM260Q9NX78 707 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 LIMCH1Q9UPQ0 1083 aa19.52■□□□□ 0.72
VPS52-215ENST00000464425 PSMC6P62333 389 aa19.51■□□□□ 0.71
VPS52-215ENST00000464425 SP2Q02086 613 aa19.51■□□□□ 0.71
VPS52-215ENST00000464425 ARHGAP1Q07960 439 aa19.51■□□□□ 0.71
VPS52-215ENST00000464425 BRDTQ58F21 947 aaPredicted RBP19.51■□□□□ 0.71
VPS52-215ENST00000464425 CCDC12Q8WUD4 166 aaPredicted RBP19.51■□□□□ 0.71
VPS52-215ENST00000464425 VPS54Q9P1Q0 977 aa19.51■□□□□ 0.71
VPS52-215ENST00000464425 A0A0U1RQG5 324 aaPredicted RBP19.5■□□□□ 0.71
VPS52-215ENST00000464425 A6NJR5 290 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 ADAMTS3O15072 1205 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 STAM2O75886 525 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 CABYRO75952 493 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 MCM2P49736 904 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 ME3Q16798 604 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 GNPTABQ3T906 1256 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 JAKMIP3Q5VZ66 844 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 XRRA1Q6P2D8 792 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 KCNV1Q6PIU1 500 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 DHX37Q8IY37 1157 aaKnown RBP19.5■□□□□ 0.71
VPS52-215ENST00000464425 INPP4AQ96PE3 977 aaPredicted RBP19.5■□□□□ 0.71
VPS52-215ENST00000464425 ZMYND12Q9H0C1 365 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 GLT8D2Q9H1C3 349 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 EHMT1Q9H9B1 1298 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 C6orf50Q9HD87 102 aa19.5■□□□□ 0.71
VPS52-215ENST00000464425 PRDM5Q9NQX1 630 aaPredicted RBP19.5■□□□□ 0.71
VPS52-215ENST00000464425 KIAA1217Q5T5P2 1943 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 SPATA31C2B4DYI2 1134 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 ARVCFO00192 962 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 LARGE1O95461 756 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 FOSP01100 380 aaPredicted RBP19.49■□□□□ 0.71
VPS52-215ENST00000464425 TGFB3P10600 412 aa19.49■□□□□ 0.71
VPS52-215ENST00000464425 UBA1P22314 1058 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms