RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
CHKB-203ENST00000464225 SAMD3Q8N6K7 520 aa11.66□□□□□ -0.54
CHKB-203ENST00000464225 PIBF1Q8WXW3 757 aa11.66□□□□□ -0.54
CHKB-203ENST00000464225 CDX2Q99626 313 aaPredicted RBP11.66□□□□□ -0.54
CHKB-203ENST00000464225 ANO2Q9NQ90 1003 aa11.66□□□□□ -0.54
CHKB-203ENST00000464225 MAP3K20Q9NYL2 800 aaKnown RBP11.66□□□□□ -0.54
CHKB-203ENST00000464225 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
CHKB-203ENST00000464225 DDX41Q9UJV9 622 aaKnown RBP11.66□□□□□ -0.54
CHKB-203ENST00000464225 MRVI1Q9Y6F6 885 aa11.66□□□□□ -0.54
CHKB-203ENST00000464225 GRXCR1A8MXD5 290 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 RGS20O76081 388 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 MYCLP12524 364 aaPredicted RBP11.65□□□□□ -0.54
CHKB-203ENST00000464225 MCM5P33992 734 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 TRAF1Q13077 416 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 PGM5Q15124 567 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 VSIG10LQ86VR7 867 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 FCHSD1Q86WN1 690 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 CTCFLQ8NI51 663 aaPredicted RBP11.65□□□□□ -0.54
CHKB-203ENST00000464225 HERVK_113Q902F9 699 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 KAT2BQ92831 832 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 VWCEQ96DN2 955 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 SCLYQ96I15 445 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 MAP3K14Q99558 947 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 SPZ1Q9BXG8 430 aa11.65□□□□□ -0.54
CHKB-203ENST00000464225 A0A0C4DFX4 3053 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 TMEM265A0A087WTH1 108 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 PLEKHA8P1O95397 391 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 FGBP02675 491 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 RXRAP19793 462 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 KIF5BP33176 963 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 PBX2P40425 430 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 CHMP4BP1P59074 171 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 NFXL1Q6ZNB6 911 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 OTOP2Q7RTS6 562 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 MYLIPQ8WY64 445 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
CHKB-203ENST00000464225 TIFAQ96CG3 184 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
CHKB-203ENST00000464225 TMEM87BQ96K49 555 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 PBX4Q9BYU1 374 aa11.64□□□□□ -0.55
CHKB-203ENST00000464225 FRMPD4Q14CM0 1322 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 CCDC69A6NI79 296 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 SORBS3O60504 671 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 ZNF286BP0CG31 522 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 CASTP20810 708 aaKnown RBP11.63□□□□□ -0.55
CHKB-203ENST00000464225 UBA1P22314 1058 aaKnown RBP11.63□□□□□ -0.55
CHKB-203ENST00000464225 CCND2P30279 289 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 LIFRP42702 1097 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 PTPN11Q06124 597 aaPredicted RBP11.63□□□□□ -0.55
CHKB-203ENST00000464225 LAMC2Q13753 1193 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 DGKDQ16760 1214 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 RAB11FIP4Q86YS3 637 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 DHX37Q8IY37 1157 aaKnown RBP11.63□□□□□ -0.55
CHKB-203ENST00000464225 TMTC2Q8N394 836 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
CHKB-203ENST00000464225 PPTC7Q8NI37 304 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.55
CHKB-203ENST00000464225 RRP36Q96EU6 259 aaKnown RBP11.63□□□□□ -0.55
CHKB-203ENST00000464225 CTAGE1Q96RT6 745 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 LZTS2Q9BRK4 669 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 MTIF3Q9H2K0 278 aaKnown RBP11.63□□□□□ -0.55
CHKB-203ENST00000464225 UNC80Q8N2C7 3258 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 TANC1Q9C0D5 1861 aa11.63□□□□□ -0.55
CHKB-203ENST00000464225 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 F2P00734 622 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 HOXD8P13378 290 aaPredicted RBP11.62□□□□□ -0.55
CHKB-203ENST00000464225 SMARCA1P28370 1054 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 GNAQP50148 359 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 MRPS9P82933 396 aaKnown RBP11.62□□□□□ -0.55
CHKB-203ENST00000464225 SP2Q02086 613 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 GRIN2CQ14957 1233 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 PTGISQ16647 500 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 CELF3Q5SZQ8 465 aaKnown RBP11.62□□□□□ -0.55
CHKB-203ENST00000464225 MYSM1Q5VVJ2 828 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 GDF6Q6KF10 455 aaPredicted RBP11.62□□□□□ -0.55
CHKB-203ENST00000464225 KCNV1Q6PIU1 500 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 DEFB128Q7Z7B8 93 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 SESTD1Q86VW0 696 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 RPUSD2Q8IZ73 545 aaKnown RBP11.62□□□□□ -0.55
CHKB-203ENST00000464225 CMTR1Q8N1G2 835 aaKnown RBP11.62□□□□□ -0.55
CHKB-203ENST00000464225 ZNF576Q9H609 170 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 SEC63Q9UGP8 760 aaKnown RBP11.62□□□□□ -0.55
CHKB-203ENST00000464225 NOD1Q9Y239 953 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 SLC12A7Q9Y666 1083 aa11.62□□□□□ -0.55
CHKB-203ENST00000464225 PRUNE2Q8WUY3 3088 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 MYH7BA7E2Y1 1941 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 PIK3CDO00329 1044 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 CDC45O75419 566 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 GGPS1O95749 300 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 PFKMP08237 780 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 IQCF3P0C7M6 154 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 CALM1P0DP23 149 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 CALM2P0DP24 149 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 CALM3P0DP25 149 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 FOSL2P15408 326 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 PSEN2P49810 448 aa11.61□□□□□ -0.55
CHKB-203ENST00000464225 BFSP2Q13515 415 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms