RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 GDF6Q6KF10 455 aaPredicted RBP20.23■□□□□ 0.83
HMGN1-209ENST00000463631 LRRC8DQ7L1W4 858 aa20.23■□□□□ 0.83
HMGN1-209ENST00000463631 MCF2L2Q86YR7 1114 aa20.23■□□□□ 0.83
HMGN1-209ENST00000463631 PNMA1Q8ND90 353 aa20.23■□□□□ 0.83
HMGN1-209ENST00000463631 DHX38Q92620 1227 aaKnown RBP20.23■□□□□ 0.83
HMGN1-209ENST00000463631 CPVLQ9H3G5 476 aa20.23■□□□□ 0.83
HMGN1-209ENST00000463631 COL20A1Q9P218 1284 aa20.23■□□□□ 0.83
HMGN1-209ENST00000463631 GTF2IRD1Q9UHL9 959 aa20.23■□□□□ 0.83
HMGN1-209ENST00000463631 CASTP20810 708 aaKnown RBP20.22■□□□□ 0.83
HMGN1-209ENST00000463631 STXBP2Q15833 593 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 ASPRV1Q53RT3 343 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 CNKSR3Q6P9H4 555 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 SEPT14Q6ZU15 432 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 ANKS1AQ92625 1134 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 HLA-CQ95604 372 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 UBA5Q9GZZ9 404 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 LMCD1Q9NZU5 365 aa20.22■□□□□ 0.83
HMGN1-209ENST00000463631 SIP14410 1827 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 F2P00734 622 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 DGKDQ16760 1214 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 LY6KQ17RY6 165 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 IQCA1Q86XH1 822 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 TBC1D5Q92609 795 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 TAAR1Q96RJ0 339 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 RMDN3Q96TC7 470 aa20.21■□□□□ 0.83
HMGN1-209ENST00000463631 PIEZO1Q92508 2521 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 LCHNA4D1U4 455 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 EFCAB14O75071 495 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 HOXD8P13378 290 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-209ENST00000463631 RRP1P56182 461 aaKnown RBP20.2■□□□□ 0.82
HMGN1-209ENST00000463631 CHMP4BP1P59074 171 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 GHRHRQ02643 423 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 QRICH1Q2TAL8 776 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 SPRED2Q7Z698 418 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 ADGRF4Q8IZF3 695 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 ZKSCAN3Q9BRR0 538 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 KATNAL1Q9BW62 490 aa20.2■□□□□ 0.82
HMGN1-209ENST00000463631 DDX41Q9UJV9 622 aaKnown RBP20.2■□□□□ 0.82
HMGN1-209ENST00000463631 ABHD14A-ACY1A0A1B0GW23 586 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 HAS3O00219 553 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 NBNO60934 754 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 KDM4AO75164 1064 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 EIF3JO75822 258 aaKnown RBP20.19■□□□□ 0.82
HMGN1-209ENST00000463631 GJB5O95377 273 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 CKBP12277 381 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 DEFB103AP81534 67 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 PPTC7Q8NI37 304 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 KAT14Q9H8E8 782 aa20.19■□□□□ 0.82
HMGN1-209ENST00000463631 MRPL11Q9Y3B7 192 aaKnown RBP20.19■□□□□ 0.82
HMGN1-209ENST00000463631 TRIM6-TRIM34B2RNG4 842 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 ZNF213O14771 459 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 PSEN2P49810 448 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 PTK7Q13308 1070 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 LAMC2Q13753 1193 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 TRIM71Q2Q1W2 868 aaKnown RBP20.18■□□□□ 0.82
HMGN1-209ENST00000463631 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 CHST3Q7LGC8 479 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 FBXO11Q86XK2 927 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 C7orf31Q8N865 590 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 ENAHQ8N8S7 591 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-209ENST00000463631 ZSCAN10Q96SZ4 725 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-209ENST00000463631 RAD9AQ99638 391 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 HDAC6Q9UBN7 1215 aa20.18■□□□□ 0.82
HMGN1-209ENST00000463631 ARIH1Q9Y4X5 557 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-209ENST00000463631 SDSP20132 328 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 HSD17B4P51659 736 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 ERVK-21P61565 698 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 ARHGEF16Q5VV41 709 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 GDPD5Q8WTR4 605 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 ZBED2Q9BTP6 218 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 JMJD4Q9H9V9 463 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 PXMP2Q9NR77 195 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 MRVI1Q9Y6F6 885 aa20.17■□□□□ 0.82
HMGN1-209ENST00000463631 MYH7BA7E2Y1 1941 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 MICAL3Q7RTP6 2002 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 OPLAHO14841 1288 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 NR3C2P08235 984 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 PARP1P09874 1014 aaKnown RBP20.16■□□□□ 0.82
HMGN1-209ENST00000463631 EIF2AK2P19525 551 aaKnown RBP20.16■□□□□ 0.82
HMGN1-209ENST00000463631 MFSD10Q14728 455 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 KIAA0753Q2KHM9 967 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 TCTN1Q2MV58 587 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 TMCO2Q7Z6W1 182 aaPredicted RBP20.16■□□□□ 0.82
HMGN1-209ENST00000463631 FAM122AQ96E09 287 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 CRBNQ96SW2 442 aa20.16■□□□□ 0.82
HMGN1-209ENST00000463631 LINC01553A4QN01 128 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 ZNF286BP0CG31 522 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 MKRN4PQ13434 485 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-209ENST00000463631 IKBKEQ14164 716 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 MBTPS1Q14703 1052 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 RILPL2Q969X0 211 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 TGS1Q96RS0 853 aaKnown RBP20.15■□□□□ 0.82
HMGN1-209ENST00000463631 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 OSBPL3Q9H4L5 887 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 SUGCTQ9HAC7 445 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 MAP3K20Q9NYL2 800 aaKnown RBP20.15■□□□□ 0.82
HMGN1-209ENST00000463631 EMSYQ7Z589 1322 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 COL4A6Q14031 1691 aa20.15■□□□□ 0.82
HMGN1-209ENST00000463631 B4E1Z4 1266 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms