RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 GIMAP6Q6P9H5 292 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 FAM160B2Q86V87 743 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 PRSS33Q8NF86 280 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 CAGE1Q8TC20 777 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 STAG1Q8WVM7 1258 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 RAD9AQ99638 391 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 C17orf80Q9BSJ5 609 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 CCDC171Q6TFL3 1326 aa13.09□□□□□ -0.31
SSR3-202ENST00000463503 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 M0R2C6 588 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 GPAA1O43292 621 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
SSR3-202ENST00000463503 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.32
SSR3-202ENST00000463503 TRAF7Q6Q0C0 670 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 CWC27Q6UX04 472 aaKnown RBP13.08□□□□□ -0.32
SSR3-202ENST00000463503 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 LRRC8DQ7L1W4 858 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 COPS5Q92905 334 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 MRPL38Q96DV4 380 aaKnown RBP13.08□□□□□ -0.32
SSR3-202ENST00000463503 ESYT1Q9BSJ8 1104 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 PRKAG3Q9UGI9 489 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 DNAH14Q0VDD8 3507 aa13.08□□□□□ -0.32
SSR3-202ENST00000463503 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
SSR3-202ENST00000463503 NFIBO00712 420 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 SELPP16109 830 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 EDNRBP24530 442 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 IRS1P35568 1242 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 PPP2R5BQ15173 497 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 ALX1Q15699 326 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 PTGISQ16647 500 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 SLC30A10Q6XR72 485 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 SESTD1Q86VW0 696 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 ADHFE1Q8IWW8 467 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 FBXO22Q8NEZ5 403 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 NEDD1Q8NHV4 660 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
SSR3-202ENST00000463503 CHURC1Q8WUH1 139 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 PABPC5Q96DU9 382 aaKnown RBP13.07□□□□□ -0.32
SSR3-202ENST00000463503 SEC62Q99442 399 aaKnown RBP13.07□□□□□ -0.32
SSR3-202ENST00000463503 DSCC1Q9BVC3 393 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
SSR3-202ENST00000463503 CCPG1Q9ULG6 757 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 DOCK5Q9H7D0 1870 aa13.07□□□□□ -0.32
SSR3-202ENST00000463503 ABHD14A-ACY1A0A1B0GW23 586 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 NKRFO15226 690 aaKnown RBP eCLIP13.06□□□□□ -0.32
SSR3-202ENST00000463503 KPNA6O60684 536 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 ARIH2O95376 493 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 ICAM1P05362 532 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 SLC1A4P43007 532 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
SSR3-202ENST00000463503 BAATQ14032 418 aaPredicted RBP13.06□□□□□ -0.32
SSR3-202ENST00000463503 MBTPS1Q14703 1052 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 TIGD5Q53EQ6 642 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 KCTD1Q719H9 257 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
SSR3-202ENST00000463503 CCDC155Q8N6L0 562 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 CHMP4CQ96CF2 233 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
SSR3-202ENST00000463503 ADD3Q9UEY8 706 aaKnown RBP13.06□□□□□ -0.32
SSR3-202ENST00000463503 ISY1Q9ULR0 285 aaKnown RBP13.06□□□□□ -0.32
SSR3-202ENST00000463503 NOD1Q9Y239 953 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 RIF1Q5UIP0 2472 aaKnown RBP13.06□□□□□ -0.32
SSR3-202ENST00000463503 FAM186AA6NE01 2351 aa13.06□□□□□ -0.32
SSR3-202ENST00000463503 ZNF292O60281 2723 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 FOXP2O15409 715 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 ST18O60284 1047 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 HSPD1P10809 573 aaKnown RBP13.05□□□□□ -0.32
SSR3-202ENST00000463503 CKBP12277 381 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 MCCP23508 829 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 LTBRP36941 435 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 IKQ13123 557 aaPredicted RBP13.05□□□□□ -0.32
SSR3-202ENST00000463503 HERC4Q5GLZ8 1057 aaPredicted RBP13.05□□□□□ -0.32
SSR3-202ENST00000463503 TCEAL5Q5H9L2 206 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 FAM117BQ6P1L5 589 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 ZNF444Q8N0Y2 327 aaPredicted RBP13.05□□□□□ -0.32
SSR3-202ENST00000463503 KAT2BQ92831 832 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 WNT8BQ93098 351 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 IL25Q9H293 177 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 ALG13Q9NP73 1137 aaKnown RBP13.05□□□□□ -0.32
SSR3-202ENST00000463503 MUTYHQ9UIF7 546 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 PLXNA4Q9HCM2 1894 aa13.05□□□□□ -0.32
SSR3-202ENST00000463503 LOXHD1Q8IVV2 1947 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 PARNO95453 639 aaKnown RBP13.04□□□□□ -0.32
SSR3-202ENST00000463503 MMP3P08254 477 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 TSPY3P0CV98 308 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 TSPY8P0CW00 308 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 TCF15Q12870 199 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 TRIM71Q2Q1W2 868 aaKnown RBP13.04□□□□□ -0.32
SSR3-202ENST00000463503 C8orf34Q49A92 452 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 EPC2Q52LR7 807 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 BRDTQ58F21 947 aaPredicted RBP13.04□□□□□ -0.32
SSR3-202ENST00000463503 IER5LQ5T953 404 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.04□□□□□ -0.328e-7■□□□□ 9.3
SSR3-202ENST00000463503 BANK1Q8NDB2 785 aa13.04□□□□□ -0.32
SSR3-202ENST00000463503 SCFD2Q8WU76 684 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms