RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SMARCC2Q8TAQ2 1214 aa18.72■□□□□ 0.59
COL1A1-202ENST00000463440 MRVI1Q9Y6F6 885 aa18.72■□□□□ 0.59
COL1A1-202ENST00000463440 KIAA1217Q5T5P2 1943 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 A6NJR5 290 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 MYL3P08590 195 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 CASTP20810 708 aaKnown RBP18.71■□□□□ 0.59
COL1A1-202ENST00000463440 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 LY6KQ17RY6 165 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 KCNV1Q6PIU1 500 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 SLC43A3Q8NBI5 491 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 BADQ92934 168 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 MTG1Q9BT17 334 aaPredicted RBP18.71■□□□□ 0.59
COL1A1-202ENST00000463440 USP26Q9BXU7 913 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 LTBP2Q14767 1821 aa18.71■□□□□ 0.59
COL1A1-202ENST00000463440 CCDC196A0A1B0GTZ2 297 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 hCG_1642624A0A1W2PR95 340 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 PIK3CDO00329 1044 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 PURAQ00577 322 aaKnown RBP18.7■□□□□ 0.58
COL1A1-202ENST00000463440 FAM126BQ8IXS8 530 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 IL31RAQ8NI17 732 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 BRF1Q92994 677 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 PSTPIP2Q9H939 334 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 DDX41Q9UJV9 622 aaKnown RBP18.7■□□□□ 0.58
COL1A1-202ENST00000463440 CNTNAP5Q8WYK1 1306 aa18.7■□□□□ 0.58
COL1A1-202ENST00000463440 RANBP2P49792 3224 aaKnown RBP18.69■□□□□ 0.58
COL1A1-202ENST00000463440 MEIS2O14770 477 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 METAP2P50579 478 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL1A1-202ENST00000463440 PSMC6P62333 389 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 APOBRQ0VD83 1088 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 USP17L6PQ6QN14 398 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 HEATR3Q7Z4Q2 680 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 FBXL16Q8N461 479 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 TBX21Q9UL17 535 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 GRIN2DO15399 1336 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 FRMPD4Q14CM0 1322 aa18.69■□□□□ 0.58
COL1A1-202ENST00000463440 STAM2O75886 525 aa18.68■□□□□ 0.58
COL1A1-202ENST00000463440 RGS20O76081 388 aa18.68■□□□□ 0.58
COL1A1-202ENST00000463440 TGFB3P10600 412 aa18.68■□□□□ 0.58
COL1A1-202ENST00000463440 ARHGAP1Q07960 439 aa18.68■□□□□ 0.58
COL1A1-202ENST00000463440 LAMC2Q13753 1193 aa18.68■□□□□ 0.58
COL1A1-202ENST00000463440 GNPTABQ3T906 1256 aa18.68■□□□□ 0.58
COL1A1-202ENST00000463440 AFG1LQ8WV93 481 aa18.68■□□□□ 0.58
COL1A1-202ENST00000463440 V9GY48 417 aaPredicted RBP18.68■□□□□ 0.58
COL1A1-202ENST00000463440 TIMP1P01033 207 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 CD4P01730 458 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 ITGB8P26012 769 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 CDC27P30260 824 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 FUT2Q10981 343 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 LRIT3Q3SXY7 679 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 XRRA1Q6P2D8 792 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 RUFY3Q7L099 469 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 DHX37Q8IY37 1157 aaKnown RBP18.67■□□□□ 0.58
COL1A1-202ENST00000463440 GPKOWQ92917 476 aaPredicted RBP eCLIP18.67■□□□□ 0.58
COL1A1-202ENST00000463440 EMID1Q96A84 441 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-202ENST00000463440 AGXT2Q9BYV1 514 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 ZSWIM6Q9HCJ5 1215 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 FAM217BQ9NTX9 383 aaPredicted RBP18.67■□□□□ 0.58
COL1A1-202ENST00000463440 CYP46A1Q9Y6A2 500 aa18.67■□□□□ 0.58
COL1A1-202ENST00000463440 hCG_1984214I3L0E3 225 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 MMP3P08254 477 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 NAPAP54920 295 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 FPGSQ05932 587 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 DGKDQ16760 1214 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 PPP1R18Q6NYC8 613 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 ZNF713Q8N859 430 aaPredicted RBP18.66■□□□□ 0.58
COL1A1-202ENST00000463440 TM6SF1Q9BZW5 370 aa18.66■□□□□ 0.58
COL1A1-202ENST00000463440 SPDYE3A6NKU9 549 aa18.65■□□□□ 0.58
COL1A1-202ENST00000463440 EIF5BO60841 1220 aaKnown RBP18.65■□□□□ 0.58
COL1A1-202ENST00000463440 ADD1P35611 737 aaKnown RBP18.65■□□□□ 0.58
COL1A1-202ENST00000463440 MRPS9P82933 396 aaKnown RBP18.65■□□□□ 0.58
COL1A1-202ENST00000463440 NBPF20Q3BBV1 942 aa18.65■□□□□ 0.58
COL1A1-202ENST00000463440 PCNX4Q63HM2 1172 aa18.65■□□□□ 0.58
COL1A1-202ENST00000463440 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
COL1A1-202ENST00000463440 PPTC7Q8NI37 304 aa18.65■□□□□ 0.58
COL1A1-202ENST00000463440 ZFP91Q96JP5 570 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-202ENST00000463440 INPP4AQ96PE3 977 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-202ENST00000463440 TRPV6Q9H1D0 765 aa18.65■□□□□ 0.58
COL1A1-202ENST00000463440 ALDH8A1Q9H2A2 487 aaPredicted RBP18.65■□□□□ 0.58
COL1A1-202ENST00000463440 NID2Q14112 1375 aa18.65■□□□□ 0.58
COL1A1-202ENST00000463440 SOX1O00570 391 aaPredicted RBP18.64■□□□□ 0.57
COL1A1-202ENST00000463440 B4GALT4O60513 344 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 GGPS1O95749 300 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 SUPT20HL2P0C7V6 817 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 UBA1P22314 1058 aaKnown RBP18.64■□□□□ 0.57
COL1A1-202ENST00000463440 UBE2SQ16763 222 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 FAM47CQ5HY64 1035 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 CELF3Q5SZQ8 465 aaKnown RBP18.64■□□□□ 0.57
COL1A1-202ENST00000463440 MYSM1Q5VVJ2 828 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 MFSD5Q6N075 450 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 NFRKBQ6P4R8 1299 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 TMEM199Q8N511 208 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 PPP1R12CQ9BZL4 782 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 GLT8D2Q9H1C3 349 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 EHMT1Q9H9B1 1298 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 MLXIPQ9HAP2 919 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 RTEL1Q9NZ71 1219 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 SCN10AQ9Y5Y9 1956 aa18.64■□□□□ 0.57
COL1A1-202ENST00000463440 FIBPO43427 364 aa18.63■□□□□ 0.57
COL1A1-202ENST00000463440 ICAM3P32942 547 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms