RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TC2NQ8N9U0 490 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 CHURC1Q8WUH1 139 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 TMX1Q9H3N1 280 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 SLC39A2Q9NP94 309 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 TAB2Q9NYJ8 693 aa14.36□□□□□ -0.11
VAPB-203ENST00000463370 SMCHD1A6NHR9 2005 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 KCNJ18B7U540 433 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 E9PMD0 336 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 MED24O75448 989 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 AMPD3Q01432 767 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 KCNJ12Q14500 433 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 Q4G0T1 1027 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 TCP11X2Q5H9J9 407 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 TTI2Q6NXR4 508 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 MOXD1Q6UVY6 613 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 CCAR2Q8N163 923 aaKnown RBP14.35□□□□□ -0.11
VAPB-203ENST00000463370 GLIS3Q8NEA6 775 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 TRPM4Q8TD43 1214 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 DDX12PQ92771 950 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 AGBL1Q96MI9 1066 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 DUSP9Q99956 384 aaKnown RBP14.35□□□□□ -0.11
VAPB-203ENST00000463370 VPS16Q9H269 839 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 KIAA1024Q9UPX6 916 aa14.35□□□□□ -0.11
VAPB-203ENST00000463370 NKRFO15226 690 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAPB-203ENST00000463370 MSH4O15457 936 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 FOSP01100 380 aaPredicted RBP14.34□□□□□ -0.11
VAPB-203ENST00000463370 LDHDQ86WU2 507 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 NAP1L4Q99733 375 aaKnown RBP14.34□□□□□ -0.11
VAPB-203ENST00000463370 LIMA1Q9UHB6 759 aaKnown RBP14.34□□□□□ -0.11
VAPB-203ENST00000463370 FEM1BQ9UK73 627 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 ZNF536O15090 1300 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 LRRC10BA6NIK2 292 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 PLA2G6O60733 806 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 HYIQ5T013 277 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 WDR18Q9BV38 432 aa14.34□□□□□ -0.11
VAPB-203ENST00000463370 SRRTQ9BXP5 876 aaKnown RBP14.34□□□□□ -0.11
VAPB-203ENST00000463370 IGLV3-22A0A075B6J6 115 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 POTEFA5A3E0 1075 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 PSMA7O14818 248 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 POTEIP0CG38 1075 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 CIITAP33076 1130 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 COPB1P53618 953 aaKnown RBP14.33□□□□□ -0.11
VAPB-203ENST00000463370 ANGEL2Q5VTE6 544 aaKnown RBP14.33□□□□□ -0.11
VAPB-203ENST00000463370 ANKRD40Q6AI12 368 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 POTEGQ6S5H5 508 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 POTEEQ6S8J3 1075 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 UNC13DQ70J99 1090 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 FAM160B2Q86V87 743 aa14.33□□□□□ -0.11
VAPB-203ENST00000463370 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.113e-10■■■■■ 36.6
VAPB-203ENST00000463370 NPHP3-ACAD11A0A0J9YXS1 232 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 H7C1D1 291 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 TNNT1P13805 278 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 IDEP14735 1019 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 NCAPH2Q6IBW4 605 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 CATSPER3Q86XQ3 398 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 SLFN12Q8IYM2 578 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 DNAJC19Q96DA6 116 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 TRIM47Q96LD4 638 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 CTAGE1Q96RT6 745 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
VAPB-203ENST00000463370 UQCRHLA0A096LP55 91 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 GCOM1H8Y6P7 765 aaPredicted RBP14.32□□□□□ -0.12
VAPB-203ENST00000463370 MEIS1O00470 390 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 N4BP3O15049 544 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 CTNND1O60716 968 aaKnown RBP14.32□□□□□ -0.12
VAPB-203ENST00000463370 SSBP05455 408 aaKnown RBP eCLIP14.32□□□□□ -0.12
VAPB-203ENST00000463370 UQCRHP07919 91 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 CYP3A4P08684 503 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 POLR2MP0CAP2 368 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 PSMC6P62333 389 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
VAPB-203ENST00000463370 RBL2Q08999 1139 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 STIM1Q13586 685 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 MTMR2Q13614 643 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 MCTP2Q6DN12 878 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 NYAP1Q6ZVC0 841 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 CPLX3Q8WVH0 158 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 P2RX5Q93086 422 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
VAPB-203ENST00000463370 DHTKD1Q96HY7 919 aaPredicted RBP14.32□□□□□ -0.12
VAPB-203ENST00000463370 VAV3Q9UKW4 847 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 SPATA31C1P0DKV0 1188 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 EHHADHQ08426 723 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 RAD51AP2Q09MP3 1159 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 LRRC41Q15345 812 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 PPP1R13BQ96KQ4 1090 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 FGFBP2Q9BYJ0 223 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 KIAA1683Q9H0B3 1180 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 KCND1Q9NSA2 647 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 EMILIN3Q9NT22 766 aa14.32□□□□□ -0.12
VAPB-203ENST00000463370 RNF225M0QZC1 329 aaPredicted RBP14.31□□□□□ -0.12
VAPB-203ENST00000463370 EML1O00423 815 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 NFIBO00712 420 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 PLA2G4BP0C869 781 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 CCNE1P24864 410 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 ZNF76P36508 570 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 SEMA3FQ13275 785 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 CNNM4Q6P4Q7 775 aa14.31□□□□□ -0.12
VAPB-203ENST00000463370 CSGALNACT2Q8N6G5 542 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms