RNA–Protein interactions for RNA: ENST00000462998.1

PTPN23-203, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

TSL 3

Gene PTPN23, Length 260 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-203ENST00000462998 POLR3EQ9NVU0 708 aa12.71□□□□□ -0.37
PTPN23-203ENST00000462998 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
PTPN23-203ENST00000462998 CNTNAP5Q8WYK1 1306 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 KIAA0355O15063 1070 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 TLR3O15455 904 aaKnown RBP12.7□□□□□ -0.38
PTPN23-203ENST00000462998 GH1P01241 217 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
PTPN23-203ENST00000462998 RPS6KB1P23443 525 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 PSMA5P28066 241 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 CDK7P50613 346 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 APOBRQ0VD83 1088 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 CCDC62Q6P9F0 684 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 HEATR3Q7Z4Q2 680 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 BRF1Q92994 677 aa12.7□□□□□ -0.38
PTPN23-203ENST00000462998 ITGB8P26012 769 aa12.69□□□□□ -0.38
PTPN23-203ENST00000462998 METAP2P50579 478 aaKnown RBP eCLIP12.69□□□□□ -0.38
PTPN23-203ENST00000462998 PURAQ00577 322 aaKnown RBP12.69□□□□□ -0.38
PTPN23-203ENST00000462998 USP17L6PQ6QN14 398 aa12.69□□□□□ -0.38
PTPN23-203ENST00000462998 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
PTPN23-203ENST00000462998 FAM126BQ8IXS8 530 aa12.69□□□□□ -0.38
PTPN23-203ENST00000462998 AFG1LQ8WV93 481 aa12.69□□□□□ -0.38
PTPN23-203ENST00000462998 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
PTPN23-203ENST00000462998 ZFP91Q96JP5 570 aaPredicted RBP12.69□□□□□ -0.38
PTPN23-203ENST00000462998 MTG1Q9BT17 334 aaPredicted RBP12.69□□□□□ -0.38
PTPN23-203ENST00000462998 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
PTPN23-203ENST00000462998 GRIN2DO15399 1336 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 FRMPD4Q14CM0 1322 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 A6NJR5 290 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 SOX1O00570 391 aaPredicted RBP12.68□□□□□ -0.38
PTPN23-203ENST00000462998 MEIS2O14770 477 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
PTPN23-203ENST00000462998 SORBS3O60504 671 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 KPNA6O60684 536 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 RGS20O76081 388 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 MMP3P08254 477 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 CDC27P30260 824 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 RCAN1P53805 252 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 CHMP4BP1P59074 171 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 ARHGAP1Q07960 439 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 UBE2SQ16763 222 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 SLC43A3Q8NBI5 491 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 USP26Q9BXU7 913 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 PSTPIP2Q9H939 334 aa12.68□□□□□ -0.38
PTPN23-203ENST00000462998 DDX41Q9UJV9 622 aaKnown RBP12.68□□□□□ -0.38
PTPN23-203ENST00000462998 CCDC196A0A1B0GTZ2 297 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 TIMP1P01033 207 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 CD4P01730 458 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 NAPAP54920 295 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 FPGSQ05932 587 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 FUT2Q10981 343 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 GNPTABQ3T906 1256 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 FAM47CQ5HY64 1035 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 WWC2Q6AWC2 1192 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 KCNV1Q6PIU1 500 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 DHX37Q8IY37 1157 aaKnown RBP12.67□□□□□ -0.38
PTPN23-203ENST00000462998 PPP1R13LQ8WUF5 828 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 SEZ6LQ9BYH1 1024 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 TRPV6Q9H1D0 765 aa12.67□□□□□ -0.38
PTPN23-203ENST00000462998 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
PTPN23-203ENST00000462998 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
PTPN23-203ENST00000462998 B4GALT4O60513 344 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 GGPS1O95749 300 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 UBA1P22314 1058 aaKnown RBP12.66□□□□□ -0.38
PTPN23-203ENST00000462998 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
PTPN23-203ENST00000462998 MRPS9P82933 396 aaKnown RBP12.66□□□□□ -0.38
PTPN23-203ENST00000462998 LAMC2Q13753 1193 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 C9orf50Q5SZB4 431 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 RUFY3Q7L099 469 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 EMID1Q96A84 441 aaPredicted RBP12.66□□□□□ -0.38
PTPN23-203ENST00000462998 ALDH8A1Q9H2A2 487 aaPredicted RBP12.66□□□□□ -0.38
PTPN23-203ENST00000462998 RTEL1Q9NZ71 1219 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 CYP46A1Q9Y6A2 500 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 SCN10AQ9Y5Y9 1956 aa12.66□□□□□ -0.38
PTPN23-203ENST00000462998 SPDYE3A6NKU9 549 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 STAM2O75886 525 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 CYP2C18P33260 490 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 SP2Q02086 613 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 SHHQ15465 462 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 DGKDQ16760 1214 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
PTPN23-203ENST00000462998 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 MFSD5Q6N075 450 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 PPTC7Q8NI37 304 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 SPATA33Q96N06 139 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 INPP4AQ96PE3 977 aaPredicted RBP12.65□□□□□ -0.38
PTPN23-203ENST00000462998 AGXT2Q9BYV1 514 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 UPF3BQ9BZI7 483 aaKnown RBP12.65□□□□□ -0.38
PTPN23-203ENST00000462998 HIPK3Q9H422 1215 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 ZSWIM6Q9HCJ5 1215 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 TRMT13Q9NUP7 481 aaKnown RBP12.65□□□□□ -0.38
PTPN23-203ENST00000462998 NID2Q14112 1375 aa12.65□□□□□ -0.38
PTPN23-203ENST00000462998 MYH7BA7E2Y1 1941 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms