RNA–Protein interactions for RNA: ENST00000462307.5

SNX21-206, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-206ENST00000462307 PSMC6P62333 389 aa18.65■□□□□ 0.58
SNX21-206ENST00000462307 C9orf50Q5SZB4 431 aa18.65■□□□□ 0.58
SNX21-206ENST00000462307 KCNV1Q6PIU1 500 aa18.65■□□□□ 0.58
SNX21-206ENST00000462307 APOA5Q6Q788 366 aa18.65■□□□□ 0.58
SNX21-206ENST00000462307 TMTC3Q6ZXV5 915 aa18.65■□□□□ 0.58
SNX21-206ENST00000462307 FBXL16Q8N461 479 aa18.65■□□□□ 0.58
SNX21-206ENST00000462307 PPP4R2Q9NY27 417 aa18.65■□□□□ 0.58
SNX21-206ENST00000462307 MEIS2O14770 477 aa18.64■□□□□ 0.57
SNX21-206ENST00000462307 EPHB4P54760 987 aa18.64■□□□□ 0.57
SNX21-206ENST00000462307 FPGSQ05932 587 aa18.64■□□□□ 0.57
SNX21-206ENST00000462307 SYNE3Q6ZMZ3 975 aa18.64■□□□□ 0.57
SNX21-206ENST00000462307 CMTR1Q8N1G2 835 aaKnown RBP18.64■□□□□ 0.57
SNX21-206ENST00000462307 PIBF1Q8WXW3 757 aa18.64■□□□□ 0.57
SNX21-206ENST00000462307 SEC63Q9UGP8 760 aaKnown RBP18.64■□□□□ 0.57
SNX21-206ENST00000462307 BRPF3Q9ULD4 1205 aa18.64■□□□□ 0.57
SNX21-206ENST00000462307 COL6A3P12111 3177 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 B4GALT4O60513 344 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 STAM2O75886 525 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 REC8O95072 547 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 MYL3P08590 195 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 RCAN1P53805 252 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 FUT2Q10981 343 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 FCHSD1Q86WN1 690 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 IL31RAQ8NI17 732 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 AFG1LQ8WV93 481 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 TCEANC2Q96MN5 208 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 ALDH8A1Q9H2A2 487 aaPredicted RBP18.63■□□□□ 0.57
SNX21-206ENST00000462307 RBM28Q9NW13 759 aaKnown RBP18.63■□□□□ 0.57
SNX21-206ENST00000462307 SNX14Q9Y5W7 946 aa18.63■□□□□ 0.57
SNX21-206ENST00000462307 TRIP12Q14669 1992 aaPredicted RBP18.62■□□□□ 0.57
SNX21-206ENST00000462307 MMP3P08254 477 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 MYCLP12524 364 aaPredicted RBP18.62■□□□□ 0.57
SNX21-206ENST00000462307 CCND2P30279 289 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 MRPS9P82933 396 aaKnown RBP18.62■□□□□ 0.57
SNX21-206ENST00000462307 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
SNX21-206ENST00000462307 LAMC2Q13753 1193 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 NBPF20Q3BBV1 942 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 MICU3Q86XE3 530 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 TRPV6Q9H1D0 765 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 FAM217BQ9NTX9 383 aaPredicted RBP18.62■□□□□ 0.57
SNX21-206ENST00000462307 MRVI1Q9Y6F6 885 aa18.62■□□□□ 0.57
SNX21-206ENST00000462307 SUPT20HL2P0C7V6 817 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 HOXD8P13378 290 aaPredicted RBP18.61■□□□□ 0.57
SNX21-206ENST00000462307 CASTP20810 708 aaKnown RBP18.61■□□□□ 0.57
SNX21-206ENST00000462307 ICAM3P32942 547 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 FAM109BQ6ICB4 259 aaPredicted RBP18.61■□□□□ 0.57
SNX21-206ENST00000462307 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 C16orf59Q7L2K0 433 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 RAB11FIP4Q86YS3 637 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 TMEM199Q8N511 208 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 PPTC7Q8NI37 304 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 AGXT2Q9BYV1 514 aa18.61■□□□□ 0.57
SNX21-206ENST00000462307 ZBTB43O43298 467 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 SP2Q02086 613 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 PPIGQ13427 754 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNX21-206ENST00000462307 DGKDQ16760 1214 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 CELF3Q5SZQ8 465 aaKnown RBP18.6■□□□□ 0.57
SNX21-206ENST00000462307 XRRA1Q6P2D8 792 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 SESTD1Q86VW0 696 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 TEX2Q8IWB9 1127 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 KAT2BQ92831 832 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 CUL5Q93034 780 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 INPP4AQ96PE3 977 aaPredicted RBP18.6■□□□□ 0.57
SNX21-206ENST00000462307 NOC4LQ9BVI4 516 aaKnown RBP18.6■□□□□ 0.57
SNX21-206ENST00000462307 HIPK3Q9H422 1215 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 PSTPIP2Q9H939 334 aa18.6■□□□□ 0.57
SNX21-206ENST00000462307 CNTNAP5Q8WYK1 1306 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 PPFIA4O75335 1185 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 CSF2RAP15509 400 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 CYP2C18P33260 490 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 RTN1Q16799 776 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 PCNX4Q63HM2 1172 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
SNX21-206ENST00000462307 SMARCC2Q8TAQ2 1214 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 JAKMIP1Q96N16 626 aaKnown RBP18.59■□□□□ 0.57
SNX21-206ENST00000462307 USP26Q9BXU7 913 aa18.59■□□□□ 0.57
SNX21-206ENST00000462307 hCG_1642624A0A1W2PR95 340 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 SPATA31C2B4DYI2 1134 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 CPA1P15085 419 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 CDC27P30260 824 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 SMAD3P84022 425 aaKnown RBP18.58■□□□□ 0.56
SNX21-206ENST00000462307 HSDL1Q3SXM5 330 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 TMEM240Q5SV17 173 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 RASIP1Q5U651 963 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 BLOC1S2Q6QNY1 142 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 Q6ZUG5 572 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 GPKOWQ92917 476 aaPredicted RBP eCLIP18.58■□□□□ 0.56
SNX21-206ENST00000462307 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.58■□□□□ 0.56
SNX21-206ENST00000462307 PPP1R12CQ9BZL4 782 aa18.58■□□□□ 0.56
SNX21-206ENST00000462307 TRMT13Q9NUP7 481 aaKnown RBP18.58■□□□□ 0.56
SNX21-206ENST00000462307 UMODL1Q5DID0 1318 aa18.57■□□□□ 0.56
SNX21-206ENST00000462307 DOCK5Q9H7D0 1870 aa18.57■□□□□ 0.56
SNX21-206ENST00000462307 KLF18A0A0U1RQI7 1052 aa18.57■□□□□ 0.56
SNX21-206ENST00000462307 HAS3O00219 553 aa18.57■□□□□ 0.56
SNX21-206ENST00000462307 UBA1P22314 1058 aaKnown RBP18.57■□□□□ 0.56
SNX21-206ENST00000462307 RPS6KB1P23443 525 aa18.57■□□□□ 0.56
SNX21-206ENST00000462307 PSMA5P28066 241 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms