RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
RTF1-202ENST00000462276 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
RTF1-202ENST00000462276 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 NLRX1Q86UT6 975 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
RTF1-202ENST00000462276 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 NUDT12Q9BQG2 462 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 DDX25Q9UHL0 483 aaKnown RBP12.11□□□□□ -0.47
RTF1-202ENST00000462276 PCDHB6Q9Y5E3 794 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 CLIC4Q9Y696 253 aa12.11□□□□□ -0.47
RTF1-202ENST00000462276 GOLGA6L4A6NEF3 574 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 TGFB3P10600 412 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 XRCC5P13010 732 aaKnown RBP12.1□□□□□ -0.47
RTF1-202ENST00000462276 EIF2AK2P19525 551 aaKnown RBP12.1□□□□□ -0.47
RTF1-202ENST00000462276 MCM4P33991 863 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 RGS2P41220 211 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 ALDH5A1P51649 535 aaPredicted RBP12.1□□□□□ -0.47
RTF1-202ENST00000462276 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 CALCRLQ16602 461 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 MORN1Q5T089 497 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 MAMDC4Q6UXC1 1216 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 TRMT44Q8IYL2 757 aaKnown RBP12.1□□□□□ -0.47
RTF1-202ENST00000462276 KRI1Q8N9T8 703 aaKnown RBP12.1□□□□□ -0.47
RTF1-202ENST00000462276 GPRASP2Q96D09 838 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 PGBD1Q96JS3 809 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 MXRA8Q9BRK3 442 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 SRPRBQ9Y5M8 271 aaKnown RBP12.1□□□□□ -0.47
RTF1-202ENST00000462276 UBIAD1Q9Y5Z9 338 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 STK24Q9Y6E0 443 aa12.1□□□□□ -0.47
RTF1-202ENST00000462276 A0A0G2JMZ2 1700 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 SOWAHBA6NEL2 793 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
RTF1-202ENST00000462276 FIBPO43427 364 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 EDIL3O43854 480 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 MARCH6O60337 910 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 OR52Z1P0C646 297 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 PSMC4P43686 418 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 ME1P48163 572 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 PRMT2P55345 433 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 CNTN2Q02246 1040 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 CEBPZQ03701 1054 aaKnown RBP12.09□□□□□ -0.47
RTF1-202ENST00000462276 PDE4DQ08499 809 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 PDIA5Q14554 519 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 PRR16Q569H4 304 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 ADALQ6DHV7 355 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 DTHD1Q6ZMT9 781 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 C4orf32Q8N8J7 132 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 USP6NLQ92738 828 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 ERO1AQ96HE7 468 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 AK8Q96MA6 479 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 INPP4AQ96PE3 977 aaPredicted RBP12.09□□□□□ -0.47
RTF1-202ENST00000462276 MTMR9Q96QG7 549 aa12.09□□□□□ -0.47
RTF1-202ENST00000462276 IGLV3-22A0A075B6J6 115 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 A0A1W2PQ27 194 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 A0A1W2PQ64 194 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 A0A1W2PQD8 194 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 FAM86B1E9PN63 330 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 GPR25O00155 361 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 SLC26A4O43511 780 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 CUTAO60888 179 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 COBLO75128 1261 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 TDP2O95551 362 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 PGK2P07205 417 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 FAM86B2P0C5J1 330 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 ITGB5P18084 799 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 ICAM3P32942 547 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 LONP1P36776 959 aaKnown RBP12.08□□□□□ -0.48
RTF1-202ENST00000462276 UBE2HP62256 183 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
RTF1-202ENST00000462276 TMEM266Q2M3C6 531 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 OLFML2BQ68BL8 750 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 PLA2G4DQ86XP0 818 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 GIMAP8Q8ND71 665 aaPredicted RBP12.08□□□□□ -0.48
RTF1-202ENST00000462276 RIT2Q99578 217 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 SENP7Q9BQF6 1050 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 KCNMB3Q9NPA1 279 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 WBP1LQ9NX94 342 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 NRBP1Q9UHY1 535 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 GJD2Q9UKL4 321 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 SYNGAP1Q96PV0 1343 aa12.08□□□□□ -0.48
RTF1-202ENST00000462276 FKTNO75072 461 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 PRPF40AO75400 957 aaKnown RBP12.07□□□□□ -0.48
RTF1-202ENST00000462276 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
RTF1-202ENST00000462276 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
RTF1-202ENST00000462276 MYCLP12524 364 aaPredicted RBP12.07□□□□□ -0.48
RTF1-202ENST00000462276 CMA1P23946 247 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
RTF1-202ENST00000462276 MTMR1Q13613 665 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 NBR1Q14596 966 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 TNS4Q8IZW8 715 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 KCTD17Q8N5Z5 321 aa12.07□□□□□ -0.48
RTF1-202ENST00000462276 LENG9Q96B70 501 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms