RNA–Protein interactions for RNA: ENST00000461636.1

THUMPD3-207, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-207ENST00000461636 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.4□□□□□ -1.22
THUMPD3-207ENST00000461636 HDAC8Q9BY41 377 aa7.4□□□□□ -1.22
THUMPD3-207ENST00000461636 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.4□□□□□ -1.22
THUMPD3-207ENST00000461636 IRF2BPLQ9H1B7 796 aa7.4□□□□□ -1.22
THUMPD3-207ENST00000461636 PANK3Q9H999 370 aa7.4□□□□□ -1.22
THUMPD3-207ENST00000461636 ZMYM5Q9UJ78 669 aa7.4□□□□□ -1.22
THUMPD3-207ENST00000461636 SMG6Q86US8 1419 aaKnown RBP7.4□□□□□ -1.22
THUMPD3-207ENST00000461636 THSD7AQ9UPZ6 1657 aa7.4□□□□□ -1.23
THUMPD3-207ENST00000461636 OR14I1A6ND48 311 aa7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 CCER2I3L3R5 266 aa7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 RFXAPO00287 272 aa7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 PSPNO60542 156 aa7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 RPL10P27635 214 aaKnown RBP7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 PCBP3P57721 371 aaKnown RBP7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 ZNF655Q8N720 491 aaPredicted RBP7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 DAGLBQ8NCG7 672 aa7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 VWCEQ96DN2 955 aa7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 GMIPQ9P107 970 aa7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 CNOT6Q9ULM6 557 aaKnown RBP7.39□□□□□ -1.23
THUMPD3-207ENST00000461636 FAM208AQ9UK61 1670 aaKnown RBP7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 NCANO14594 1321 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 USP2O75604 605 aaPredicted RBP7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 RAD51AP2Q09MP3 1159 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 DDX10Q13206 875 aaKnown RBP7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 SLC14A2Q15849 920 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 ZNF385BQ569K4 471 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 ARSHQ5FYA8 562 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 ADGRF1Q5T601 910 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 ZNF772Q68DY9 489 aaPredicted RBP7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 DPH6Q7L8W6 267 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 UNC5CLQ8IV45 518 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 KCNH5Q8NCM2 988 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 FBXO27Q8NI29 283 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 G6PC3Q9BUM1 346 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 LRRC3Q9BY71 257 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 BACH2Q9BYV9 841 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 KBTBD4Q9NVX7 518 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 EBF1Q9UH73 591 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 ZNF281Q9Y2X9 895 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 SUPT16HQ9Y5B9 1047 aaKnown RBP7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 BRWD3Q6RI45 1802 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 RGPD2P0DJD1 1756 aa7.38□□□□□ -1.23
THUMPD3-207ENST00000461636 RGS12O14924 1447 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 NCAPD2Q15021 1401 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 RTL1A6NKG5 1358 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 KIF24Q5T7B8 1368 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 B8ZZF3 427 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 PRRG2O14669 202 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 TLR3O15455 904 aaKnown RBP7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 GARTP22102 1010 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 KIR2DL2P43627 348 aaPredicted RBP7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 CTSWP56202 376 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 CHRNA2Q15822 529 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 VPS72Q15906 364 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 MEX3CQ5U5Q3 659 aaKnown RBP7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 GIMAP6Q6P9H5 292 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 NLRX1Q86UT6 975 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 SHISA4Q96DD7 197 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 MAP6Q96JE9 813 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 FOXP3Q9BZS1 431 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 PRDM11Q9NQV5 511 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 TCFL5Q9UL49 500 aa7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 PARP4Q9UKK3 1724 aaKnown RBP7.37□□□□□ -1.23
THUMPD3-207ENST00000461636 DISP2A7MBM2 1401 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 BLMP54132 1417 aaPredicted RBP7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 MAP3K19Q56UN5 1328 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 SPATA31A5Q5VU36 1347 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 SPATA31A7Q8IWB4 1347 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 HRKO00198 91 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 UBOX5O94941 541 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 FBLN1P23142 703 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 HDLBPQ00341 1268 aaKnown RBP7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 TCERG1LQ5VWI1 586 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 CEP128Q6ZU80 1094 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 ERMP1Q7Z2K6 904 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 NOP9Q86U38 636 aaKnown RBP7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 TMEM151BQ8IW70 566 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 USHBP1Q8N6Y0 703 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 TCTN2Q96GX1 697 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 COG3Q96JB2 828 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 TANGO6Q9C0B7 1094 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 BTG4Q9NY30 223 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 TRPC5Q9UL62 973 aaPredicted RBP7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 PCDHB14Q9Y5E9 798 aa7.36□□□□□ -1.23
THUMPD3-207ENST00000461636 RGPD1P0DJD0 1748 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 NRDCO43847 1150 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 ATE1O95260 518 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 EIF4A3P38919 411 aaKnown RBP7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 GALK1P51570 392 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 RBM6P78332 1123 aaKnown RBP7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 MRPL58Q14197 206 aaKnown RBP7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 OLFML2BQ68BL8 750 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 OVOS1Q6IE37 1185 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 FBXL19Q6PCT2 694 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 SIRT2Q8IXJ6 389 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 NGEFQ8N5V2 710 aa7.35□□□□□ -1.23
THUMPD3-207ENST00000461636 LINC00116Q8NCU8 138 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms