RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 KIAA1211LQ6NV74 962 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 STK32CQ86UX6 486 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 ZC3H18Q86VM9 953 aaKnown RBP7.16□□□□□ -1.26
CFHR3-204ENST00000461558 TEX2Q8IWB9 1127 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 SEC14L1Q92503 715 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 EMC9Q9Y3B6 208 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 SLC6A11P48066 632 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 PPP2R5EQ16537 467 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 FAM126BQ8IXS8 530 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 TXNDC5Q8NBS9 432 aaKnown RBP7.15□□□□□ -1.26
CFHR3-204ENST00000461558 RASGRP4Q8TDF6 673 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 DVL3Q92997 716 aaPredicted RBP7.15□□□□□ -1.26
CFHR3-204ENST00000461558 MENTQ9BUN1 341 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 MRIQ9BWK5 157 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 BTG4Q9NY30 223 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 ZNF536O15090 1300 aa7.15□□□□□ -1.26
CFHR3-204ENST00000461558 C22orf46C9J442 243 aa7.14□□□□□ -1.27
CFHR3-204ENST00000461558 INF2Q27J81 1249 aa7.14□□□□□ -1.27
CFHR3-204ENST00000461558 POMZP3Q6PJE2 187 aa7.14□□□□□ -1.27
CFHR3-204ENST00000461558 VHLLQ6RSH7 139 aa7.14□□□□□ -1.27
CFHR3-204ENST00000461558 GLB1LQ6UWU2 654 aa7.14□□□□□ -1.27
CFHR3-204ENST00000461558 CRACR2BQ8N4Y2 399 aaPredicted RBP7.14□□□□□ -1.27
CFHR3-204ENST00000461558 BVESQ8NE79 360 aa7.14□□□□□ -1.27
CFHR3-204ENST00000461558 GPRASP2Q96D09 838 aa7.14□□□□□ -1.27
CFHR3-204ENST00000461558 DDX3XO00571 662 aaKnown RBP eCLIP7.13□□□□□ -1.27
CFHR3-204ENST00000461558 CYR61O00622 381 aa7.13□□□□□ -1.27
CFHR3-204ENST00000461558 CASP7P55210 303 aa7.13□□□□□ -1.27
CFHR3-204ENST00000461558 LIMS2Q7Z4I7 341 aa7.13□□□□□ -1.27
CFHR3-204ENST00000461558 SHDQ96IW2 340 aa7.13□□□□□ -1.27
CFHR3-204ENST00000461558 ST6GALNAC2Q9UJ37 374 aa7.13□□□□□ -1.27
CFHR3-204ENST00000461558 FPR2P25090 351 aa7.12□□□□□ -1.27
CFHR3-204ENST00000461558 STAT5AP42229 794 aa7.12□□□□□ -1.27
CFHR3-204ENST00000461558 MROH9Q5TGP6 573 aa7.12□□□□□ -1.27
CFHR3-204ENST00000461558 MILR1Q7Z6M3 343 aa7.12□□□□□ -1.27
CFHR3-204ENST00000461558 RIOX2Q8IUF8 465 aa7.12□□□□□ -1.27
CFHR3-204ENST00000461558 SH3RF3Q8TEJ3 882 aaPredicted RBP7.12□□□□□ -1.27
CFHR3-204ENST00000461558 LCORQ96JN0 433 aaPredicted RBP7.12□□□□□ -1.27
CFHR3-204ENST00000461558 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 SCAMP3O14828 347 aaKnown RBP7.11□□□□□ -1.27
CFHR3-204ENST00000461558 B4GALT3O60512 393 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 SLPIP03973 132 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 GTF2IRD2BQ6EKJ0 949 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 GTF2IRD2Q86UP8 949 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 TRIM59Q8IWR1 403 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 Q8N1Y9 231 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 NPLOC4Q8TAT6 608 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 FRS2Q8WU20 508 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 APBA2Q99767 749 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 NGRNQ9NPE2 291 aaKnown RBP7.11□□□□□ -1.27
CFHR3-204ENST00000461558 CYP26B1Q9NR63 512 aa7.11□□□□□ -1.27
CFHR3-204ENST00000461558 NOP56O00567 594 aaKnown RBP7.1□□□□□ -1.27
CFHR3-204ENST00000461558 LAMTOR5O43504 91 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 RECKO95980 971 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 NAT2P11245 290 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 ZNF28P17035 718 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 NASPP49321 788 aaPredicted RBP7.1□□□□□ -1.27
CFHR3-204ENST00000461558 ZNF143P52747 638 aaPredicted RBP7.1□□□□□ -1.27
CFHR3-204ENST00000461558 RPL11P62913 178 aaKnown RBP7.1□□□□□ -1.27
CFHR3-204ENST00000461558 CYP4F3Q08477 520 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 ADAM9Q13443 819 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 SURF1Q15526 300 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 CR1LQ2VPA4 569 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 SPRED1Q7Z699 444 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 METTL16Q86W50 562 aaKnown RBP7.1□□□□□ -1.27
CFHR3-204ENST00000461558 ZFPM1Q8IX07 1006 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 Q8N1X5 172 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 KISS1RQ969F8 398 aaPredicted RBP7.1□□□□□ -1.27
CFHR3-204ENST00000461558 NKX2-4Q9H2Z4 354 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 SLITRK6Q9H5Y7 841 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 PPP4R1LQ9P1A2 415 aa7.1□□□□□ -1.27
CFHR3-204ENST00000461558 GJA8P48165 433 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 NKX3-2P78367 333 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 CDSNQ15517 529 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 PRAMEF18Q5VWM3 479 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 IQCEQ6IPM2 695 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 PLEKHH3Q7Z736 793 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 NLRP10Q86W26 655 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 FAM169BQ8N8A8 192 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 MRGPRX3Q96LB0 322 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 YIPF4Q9BSR8 244 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 TSC22D4Q9Y3Q8 395 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 TIMM13Q9Y5L4 95 aaPredicted RBP7.09□□□□□ -1.27
CFHR3-204ENST00000461558 X6R8D5 127 aa7.09□□□□□ -1.27
CFHR3-204ENST00000461558 ACVRL1P37023 503 aa7.08□□□□□ -1.28
CFHR3-204ENST00000461558 CRIP3Q6Q6R5 217 aa7.08□□□□□ -1.28
CFHR3-204ENST00000461558 USP51Q70EK9 711 aa7.08□□□□□ -1.28
CFHR3-204ENST00000461558 CEP68Q76N32 757 aa7.08□□□□□ -1.28
CFHR3-204ENST00000461558 CPLX3Q8WVH0 158 aa7.08□□□□□ -1.28
CFHR3-204ENST00000461558 TRMT2BQ96GJ1 504 aaKnown RBP7.08□□□□□ -1.28
CFHR3-204ENST00000461558 LGR4Q9BXB1 951 aa7.08□□□□□ -1.28
CFHR3-204ENST00000461558 ZNF652Q9Y2D9 606 aa7.08□□□□□ -1.28
CFHR3-204ENST00000461558 CYP1A1P04798 512 aaPredicted RBP7.07□□□□□ -1.28
CFHR3-204ENST00000461558 BCL6P41182 706 aa7.07□□□□□ -1.28
CFHR3-204ENST00000461558 ICAM4Q14773 271 aa7.07□□□□□ -1.28
CFHR3-204ENST00000461558 E4F1Q66K89 784 aaPredicted RBP7.07□□□□□ -1.28
CFHR3-204ENST00000461558 CCDC103Q8IW40 242 aa7.07□□□□□ -1.28
CFHR3-204ENST00000461558 PPP1R14AQ96A00 147 aa7.07□□□□□ -1.28
CFHR3-204ENST00000461558 MBD6Q96DN6 1003 aa7.07□□□□□ -1.28
CFHR3-204ENST00000461558 YTHDC1Q96MU7 727 aaKnown RBP7.07□□□□□ -1.28
CFHR3-204ENST00000461558 FZD7O75084 574 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms