RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 MDM2Q00987 491 aaPredicted RBP25.92■■□□□ 1.74
TRAF4-207ENST00000461195 RUFY3Q7L099 469 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 VSIG10LQ86VR7 867 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 SMARCC2Q8TAQ2 1214 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 AGXT2Q9BYV1 514 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 ZSWIM6Q9HCJ5 1215 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 FAM217BQ9NTX9 383 aaPredicted RBP25.92■■□□□ 1.74
TRAF4-207ENST00000461195 POLR3EQ9NVU0 708 aa25.92■■□□□ 1.74
TRAF4-207ENST00000461195 CCDC196A0A1B0GTZ2 297 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 CDC27P30260 824 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 FUT2Q10981 343 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 LY6KQ17RY6 165 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 USP17L6PQ6QN14 398 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 HEATR3Q7Z4Q2 680 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 SH3RF1Q7Z6J0 888 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 IL31RAQ8NI17 732 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 PSTPIP2Q9H939 334 aa25.91■■□□□ 1.74
TRAF4-207ENST00000461195 FRMPD4Q14CM0 1322 aa25.9■■□□□ 1.74
TRAF4-207ENST00000461195 TRIM43BA6NCK2 446 aa25.9■■□□□ 1.74
TRAF4-207ENST00000461195 MEIS2O14770 477 aa25.9■■□□□ 1.74
TRAF4-207ENST00000461195 GH1P01241 217 aa25.9■■□□□ 1.74
TRAF4-207ENST00000461195 TRIM43Q96BQ3 446 aaPredicted RBP25.9■■□□□ 1.74
TRAF4-207ENST00000461195 TM6SF1Q9BZW5 370 aa25.9■■□□□ 1.74
TRAF4-207ENST00000461195 UBE2OQ9C0C9 1292 aaKnown RBP25.9■■□□□ 1.74
TRAF4-207ENST00000461195 CYP46A1Q9Y6A2 500 aa25.9■■□□□ 1.74
TRAF4-207ENST00000461195 MRVI1Q9Y6F6 885 aa25.9■■□□□ 1.74
TRAF4-207ENST00000461195 COL6A3P12111 3177 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 A6NJR5 290 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 MYL3P08590 195 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 FAAP100Q0VG06 881 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 ITGA7Q13683 1181 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 KCNV1Q6PIU1 500 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 SLC43A3Q8NBI5 491 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 GPKOWQ92917 476 aaPredicted RBP eCLIP25.89■■□□□ 1.74
TRAF4-207ENST00000461195 SEZ6LQ9BYH1 1024 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 TMEM39AQ9NV64 488 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 DDX41Q9UJV9 622 aaKnown RBP25.89■■□□□ 1.74
TRAF4-207ENST00000461195 V9GY48 417 aaPredicted RBP25.89■■□□□ 1.74
TRAF4-207ENST00000461195 NID2Q14112 1375 aa25.89■■□□□ 1.74
TRAF4-207ENST00000461195 KIAA0355O15063 1070 aa25.88■■□□□ 1.73
TRAF4-207ENST00000461195 KPNA6O60684 536 aa25.88■■□□□ 1.73
TRAF4-207ENST00000461195 ADD1P35611 737 aaKnown RBP25.88■■□□□ 1.73
TRAF4-207ENST00000461195 PURAQ00577 322 aaKnown RBP25.88■■□□□ 1.73
TRAF4-207ENST00000461195 ARHGAP1Q07960 439 aa25.88■■□□□ 1.73
TRAF4-207ENST00000461195 WWC2Q6AWC2 1192 aa25.88■■□□□ 1.73
TRAF4-207ENST00000461195 TLR3O15455 904 aaKnown RBP25.87■■□□□ 1.73
TRAF4-207ENST00000461195 EIF5BO60841 1220 aaKnown RBP25.87■■□□□ 1.73
TRAF4-207ENST00000461195 RGS20O76081 388 aa25.87■■□□□ 1.73
TRAF4-207ENST00000461195 FAM126BQ8IXS8 530 aa25.87■■□□□ 1.73
TRAF4-207ENST00000461195 SLC17A8Q8NDX2 589 aa25.87■■□□□ 1.73
TRAF4-207ENST00000461195 MTG1Q9BT17 334 aaPredicted RBP25.87■■□□□ 1.73
TRAF4-207ENST00000461195 GRIN2DO15399 1336 aa25.87■■□□□ 1.73
TRAF4-207ENST00000461195 MYH7BA7E2Y1 1941 aa25.86■■□□□ 1.73
TRAF4-207ENST00000461195 hCG_1984214I3L0E3 225 aa25.86■■□□□ 1.73
TRAF4-207ENST00000461195 STAM2O75886 525 aa25.86■■□□□ 1.73
TRAF4-207ENST00000461195 EVCP57679 992 aa25.86■■□□□ 1.73
TRAF4-207ENST00000461195 PSMC6P62333 389 aa25.86■■□□□ 1.73
TRAF4-207ENST00000461195 ZNF713Q8N859 430 aaPredicted RBP25.86■■□□□ 1.73
TRAF4-207ENST00000461195 AFG1LQ8WV93 481 aa25.86■■□□□ 1.73
TRAF4-207ENST00000461195 TGFB3P10600 412 aa25.85■■□□□ 1.73
TRAF4-207ENST00000461195 RAG1P15918 1043 aa25.85■■□□□ 1.73
TRAF4-207ENST00000461195 NAPAP54920 295 aa25.85■■□□□ 1.73
TRAF4-207ENST00000461195 MRPS9P82933 396 aaKnown RBP25.85■■□□□ 1.73
TRAF4-207ENST00000461195 GNPTABQ3T906 1256 aa25.85■■□□□ 1.73
TRAF4-207ENST00000461195 PPP1R18Q6NYC8 613 aa25.85■■□□□ 1.73
TRAF4-207ENST00000461195 XRRA1Q6P2D8 792 aa25.85■■□□□ 1.73
TRAF4-207ENST00000461195 BADQ92934 168 aa25.85■■□□□ 1.73
TRAF4-207ENST00000461195 EMID1Q96A84 441 aaPredicted RBP25.85■■□□□ 1.73
TRAF4-207ENST00000461195 ZFP91Q96JP5 570 aaPredicted RBP25.85■■□□□ 1.73
TRAF4-207ENST00000461195 UPF3BQ9BZI7 483 aaKnown RBP25.85■■□□□ 1.73
TRAF4-207ENST00000461195 MMP3P08254 477 aa25.84■■□□□ 1.73
TRAF4-207ENST00000461195 LAMC2Q13753 1193 aa25.84■■□□□ 1.73
TRAF4-207ENST00000461195 TOB2Q14106 344 aaPredicted RBP25.84■■□□□ 1.73
TRAF4-207ENST00000461195 UBE2SQ16763 222 aa25.84■■□□□ 1.73
TRAF4-207ENST00000461195 PCNX4Q63HM2 1172 aa25.84■■□□□ 1.73
TRAF4-207ENST00000461195 DHX37Q8IY37 1157 aaKnown RBP25.84■■□□□ 1.73
TRAF4-207ENST00000461195 TDHQ8IZJ6 230 aa25.84■■□□□ 1.73
TRAF4-207ENST00000461195 TBX21Q9UL17 535 aa25.84■■□□□ 1.73
TRAF4-207ENST00000461195 SCN10AQ9Y5Y9 1956 aa25.84■■□□□ 1.73
TRAF4-207ENST00000461195 A0A0C4DFX4 3053 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 SPDYE3A6NKU9 549 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 STXBP3O00186 592 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 CD4P01730 458 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 ITGB8P26012 769 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 PDIA3P30101 505 aaKnown RBP25.83■■□□□ 1.73
TRAF4-207ENST00000461195 TYW1BQ6NUM6 668 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 TEX2Q8IWB9 1127 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 INPP4AQ96PE3 977 aaPredicted RBP25.83■■□□□ 1.73
TRAF4-207ENST00000461195 BARHL2Q9NY43 387 aa25.83■■□□□ 1.73
TRAF4-207ENST00000461195 ANAPC15P60006 121 aa25.82■■□□□ 1.72
TRAF4-207ENST00000461195 PFKFB3Q16875 520 aaPredicted RBP25.82■■□□□ 1.72
TRAF4-207ENST00000461195 PPTC7Q8NI37 304 aa25.82■■□□□ 1.72
TRAF4-207ENST00000461195 RIC8AQ9NPQ8 531 aa25.82■■□□□ 1.72
TRAF4-207ENST00000461195 PDRG1Q9NUG6 133 aa25.82■■□□□ 1.72
TRAF4-207ENST00000461195 RTEL1Q9NZ71 1219 aa25.82■■□□□ 1.72
TRAF4-207ENST00000461195 GGPS1O95749 300 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 TIMP1P01033 207 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 SCG2P13521 617 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 ICAM3P32942 547 aa25.81■■□□□ 1.72
TRAF4-207ENST00000461195 ADCY7P51828 1080 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms