RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 ACPPP15309 386 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 ATP11AP98196 1134 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 ENOX2Q16206 610 aaKnown RBP8.35□□□□□ -1.07
NUP50-212ENST00000461194 NOL9Q5SY16 702 aaKnown RBP8.35□□□□□ -1.07
NUP50-212ENST00000461194 C8orf86Q6ZUL3 223 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 ERO1BQ86YB8 467 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 CERS3Q8IU89 383 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 NPAS4Q8IUM7 802 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 GALNT12Q8IXK2 581 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 MAGEB6Q8N7X4 407 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 EPS8L3Q8TE67 593 aaKnown RBP8.35□□□□□ -1.07
NUP50-212ENST00000461194 DNAJC2Q99543 621 aaKnown RBP8.35□□□□□ -1.07
NUP50-212ENST00000461194 HAUS7Q99871 368 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 BCL11AQ9H165 835 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 RASSF4Q9H2L5 321 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 BOLA2Q9H3K6 86 aa8.35□□□□□ -1.07
NUP50-212ENST00000461194 JPH1Q9HDC5 661 aaPredicted RBP8.35□□□□□ -1.07
NUP50-212ENST00000461194 COL2A1P02458 1487 aaPredicted RBP8.34□□□□□ -1.07
NUP50-212ENST00000461194 IGF2BP3O00425 579 aaKnown RBP eCLIP8.34□□□□□ -1.07
NUP50-212ENST00000461194 GOLIM4O00461 696 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 TBC1D8O95759 1140 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 ERCC3P19447 782 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 GTF2A2P52657 109 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 PPATQ06203 517 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 PPIL2Q13356 520 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 CEP135Q66GS9 1140 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 OTUD7BQ6GQQ9 843 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 KANK3Q6NY19 840 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 C20orf204Q6ZNR8 217 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 TGFBRAP1Q8WUH2 860 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 OSMRQ99650 979 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 PTPN18Q99952 460 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 PBX4Q9BYU1 374 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 DHX36Q9H2U1 1008 aaKnown RBP8.34□□□□□ -1.07
NUP50-212ENST00000461194 ECHDC1Q9NTX5 307 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 PAG1Q9NWQ8 432 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 AKAP11Q9UKA4 1901 aa8.34□□□□□ -1.07
NUP50-212ENST00000461194 FLT1P17948 1338 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 MYH2Q9UKX2 1941 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 CCL15-CCL14A0A0B4J2E2 113 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 CTNND1O60716 968 aaKnown RBP8.33□□□□□ -1.08
NUP50-212ENST00000461194 LILRB5O75023 590 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 GADD45BO75293 160 aaPredicted RBP8.33□□□□□ -1.08
NUP50-212ENST00000461194 PDE6AP16499 860 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 IRS1P35568 1242 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 DYNLL1P63167 89 aaKnown RBP8.33□□□□□ -1.08
NUP50-212ENST00000461194 ATP2B2Q01814 1243 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 SNAPC2Q13487 334 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 HDAC1Q13547 482 aaPredicted RBP8.33□□□□□ -1.08
NUP50-212ENST00000461194 CCL15Q16663 113 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 SLC9C2Q5TAH2 1124 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 MAPKAPK5Q8IW41 473 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 SCYL3Q8IZE3 742 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 MIGA1Q8NAN2 632 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 BRI3BPQ8WY22 251 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 EDC3Q96F86 508 aaKnown RBP8.33□□□□□ -1.08
NUP50-212ENST00000461194 LPIN3Q9BQK8 851 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 ZKSCAN3Q9BRR0 538 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 RIOK1Q9BRS2 568 aaKnown RBP8.33□□□□□ -1.08
NUP50-212ENST00000461194 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.33□□□□□ -1.08
NUP50-212ENST00000461194 DZANK1Q9NVP4 752 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 PI4KBQ9UBF8 816 aa8.33□□□□□ -1.08
NUP50-212ENST00000461194 HERC5Q9UII4 1024 aaKnown RBP8.33□□□□□ -1.08
NUP50-212ENST00000461194 ZNF532Q9HCE3 1301 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 A0A1W2PP55 124 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 TCRBV5S4A2TA0A5A2 114 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
NUP50-212ENST00000461194 CETPP11597 493 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 PTPRAP18433 802 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 ADD2P35612 726 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 SNRPNP63162 240 aaKnown RBP8.32□□□□□ -1.08
NUP50-212ENST00000461194 COL19A1Q14993 1142 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 PEAR1Q5VY43 1037 aaPredicted RBP8.32□□□□□ -1.08
NUP50-212ENST00000461194 GDF6Q6KF10 455 aaPredicted RBP8.32□□□□□ -1.08
NUP50-212ENST00000461194 METTL16Q86W50 562 aaKnown RBP8.32□□□□□ -1.08
NUP50-212ENST00000461194 FOXP4Q8IVH2 680 aaPredicted RBP8.32□□□□□ -1.08
NUP50-212ENST00000461194 ZNF296Q8WUU4 475 aaPredicted RBP8.32□□□□□ -1.08
NUP50-212ENST00000461194 GCC1Q96CN9 775 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 GPATCH3Q96I76 525 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 HHIPQ96QV1 700 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.32□□□□□ -1.08
NUP50-212ENST00000461194 R3HDMLQ9H3Y0 253 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 NPHS2Q9NP85 383 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 PICK1Q9NRD5 415 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 FRRS1LQ9P0K9 344 aa8.32□□□□□ -1.08
NUP50-212ENST00000461194 SUPT16HQ9Y5B9 1047 aaKnown RBP8.32□□□□□ -1.08
NUP50-212ENST00000461194 PDE2AO00408 941 aaPredicted RBP8.31□□□□□ -1.08
NUP50-212ENST00000461194 CXCL11O14625 94 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 HLA-DOAP06340 250 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 CAP2P40123 477 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 CRHR2Q13324 411 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 UBE3CQ15386 1083 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.31□□□□□ -1.08
NUP50-212ENST00000461194 ALG1LQ6GMV1 187 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 FAM43AQ8N2R8 423 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 EXOC6Q8TAG9 804 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
NUP50-212ENST00000461194 ZCCHC17Q9NP64 241 aaKnown RBP8.31□□□□□ -1.08
NUP50-212ENST00000461194 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
NUP50-212ENST00000461194 TRIM33Q9UPN9 1127 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms