RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 FOXP2O15409 715 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 PRDM1O75626 825 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 TTLL1O95922 423 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 GH2P01242 217 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 SHMT1P34896 483 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 ADH7P40394 386 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 ZNF157P51786 506 aaPredicted RBP6.95□□□□□ -1.3
NUP98-208ENST00000461047 INHBEP58166 350 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 PRRT3Q5FWE3 981 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 NOL9Q5SY16 702 aaKnown RBP6.95□□□□□ -1.3
NUP98-208ENST00000461047 LDLRAD1Q5T700 205 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 OTUD7BQ6GQQ9 843 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 NFXL1Q6ZNB6 911 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 DGKHQ86XP1 1220 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 KCNB2Q92953 911 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 TNFRSF25Q93038 417 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 HHIPL1Q96JK4 782 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 JAKMIP1Q96N16 626 aaKnown RBP6.95□□□□□ -1.3
NUP98-208ENST00000461047 FEZ1Q99689 392 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 IL25Q9H293 177 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 IGFLR1Q9H665 355 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 KAT14Q9H8E8 782 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 TMOD4Q9NZQ9 345 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 ZSWIM5Q9P217 1185 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 ZBTB21Q9ULJ3 1066 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 SYNPO2Q9UMS6 1093 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 STX8Q9UNK0 236 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.95□□□□□ -1.3
NUP98-208ENST00000461047 SNX14Q9Y5W7 946 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 ZHX2Q9Y6X8 837 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 WDR19Q8NEZ3 1342 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 PASKQ96RG2 1323 aa6.95□□□□□ -1.3
NUP98-208ENST00000461047 TGFBR3LH3BV60 316 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 M0R082 166 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 CXCL11O14625 94 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 PRC1O43663 620 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 ZBTB48P10074 688 aaPredicted RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 TOP1P11387 765 aaKnown RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 CETPP11597 493 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 CASTP20810 708 aaKnown RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 INPP5BP32019 993 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 RBM25P49756 843 aaKnown RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 GTF2A2P52657 109 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 ICA1Q05084 483 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 PABPC4Q13310 644 aaKnown RBP eCLIP6.94□□□□□ -1.3
NUP98-208ENST00000461047 SNAPC2Q13487 334 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 WTAPQ15007 396 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 RABEP1Q15276 862 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 DEFB115Q30KQ5 88 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 TMEM67Q5HYA8 995 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 FAM47AQ5JRC9 791 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 IFIT1BQ5T764 474 aaKnown RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 IER5Q5VY09 327 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 CST9Q5W186 159 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 RGMBQ6NW40 437 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 RUFY3Q7L099 469 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 FASTKD5Q7L8L6 764 aaKnown RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 CATIPQ7Z7H3 387 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 TBC1D10CQ8IV04 446 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 SLC44A5Q8NCS7 719 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.3
NUP98-208ENST00000461047 ZNF417Q8TAU3 575 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 ZKSCAN4Q969J2 545 aaPredicted RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 ZNF587Q96SQ5 575 aaPredicted RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 WDR18Q9BV38 432 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 UBE2OQ9C0C9 1292 aaKnown RBP6.94□□□□□ -1.3
NUP98-208ENST00000461047 ELP3Q9H9T3 547 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 EFCC1Q9HA90 598 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 PDRG1Q9NUG6 133 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 NYAP2Q9P242 653 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 CLIP2Q9UDT6 1046 aa6.94□□□□□ -1.3
NUP98-208ENST00000461047 CCDC196A0A1B0GTZ2 297 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 MANSC4A6NHS7 340 aaPredicted RBP6.93□□□□□ -1.3
NUP98-208ENST00000461047 DHX16O60231 1041 aaKnown RBP6.93□□□□□ -1.3
NUP98-208ENST00000461047 PROCP04070 461 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 SPATA31C1P0DKV0 1188 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 CALM1P0DP23 149 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 CALM2P0DP24 149 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 CALM3P0DP25 149 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 AKR1B1P15121 316 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 PTPRAP18433 802 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 RPS6KB1P23443 525 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 KIF5BP33176 963 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 MCM2P49736 904 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 NEK4P51957 841 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 C1QTNF8P60827 252 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 SREBF2Q12772 1141 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 SPP2Q13103 211 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 NOGQ13253 232 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 PPIL2Q13356 520 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 VGLL4Q14135 290 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 SEPT2Q15019 361 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 PPP2R5BQ15173 497 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 DLK2Q6UY11 383 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.93□□□□□ -1.3
NUP98-208ENST00000461047 LPAR1Q92633 364 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 OPTNQ96CV9 577 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 MTMR4Q9NYA4 1195 aa6.93□□□□□ -1.3
NUP98-208ENST00000461047 ISY1Q9ULR0 285 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 493.8 ms