RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 BAZ2BQ9UIF8 2168 aaKnown RBP8.51□□□□□ -1.05
RTN4-212ENST00000461004 ERICH2A1L162 156 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 TNPO2O14787 897 aaKnown RBP8.51□□□□□ -1.05
RTN4-212ENST00000461004 CYTH3O43739 400 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 ZBED4O75132 1171 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 RPS6KB1P23443 525 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 STAT3P40763 770 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 FLT3LGP49771 235 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 APOBRQ0VD83 1088 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 KRT32Q14532 448 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 KIF22Q14807 665 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 GRM4Q14833 912 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 MAP7D1Q3KQU3 841 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 OXLD1Q5BKU9 147 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 BLOC1S2Q6QNY1 142 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 NFXL1Q6ZNB6 911 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 Q6ZUG5 572 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 PLEKHH3Q7Z736 793 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 FAM160B2Q86V87 743 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 ADGRF4Q8IZF3 695 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 ZNF654Q8IZM8 581 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 MB21D1Q8N884 522 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 SH3TC2Q8TF17 1288 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 GTF3C2Q8WUA4 911 aaPredicted RBP8.51□□□□□ -1.05
RTN4-212ENST00000461004 CHURC1Q8WUH1 139 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 TMEM87BQ96K49 555 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 CYLDQ9NQC7 956 aa8.51□□□□□ -1.05
RTN4-212ENST00000461004 COL11A1P12107 1806 aaPredicted RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 A0A0G2JMZ2 1700 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 CCDC69A6NI79 296 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 KLRF2D3W0D1 207 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 EPB41L2O43491 1005 aaKnown RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 PLA2G6O60733 806 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 DTNBO60941 627 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 COBLO75128 1261 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 PLEKHA8P1O95397 391 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 MYCP01106 439 aaPredicted RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 PARP1P09874 1014 aaKnown RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 ELNP15502 786 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 CYP2B6P20813 491 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 ADD1P35611 737 aaKnown RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 LIFRP42702 1097 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 TOB2Q14106 344 aaPredicted RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 SART3Q15020 963 aaKnown RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 CCL14Q16627 93 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 MUM1L1Q5H9M0 696 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 SNRNP48Q6IEG0 339 aaKnown RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 CATIPQ7Z7H3 387 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 RIOX2Q8IUF8 465 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 TNS4Q8IZW8 715 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 NPLOC4Q8TAT6 608 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 USP6NLQ92738 828 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
RTN4-212ENST00000461004 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 JMJD4Q9H9V9 463 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 HOMER2Q9NSB8 354 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 PLXNB2O15031 1838 aa8.5□□□□□ -1.05
RTN4-212ENST00000461004 MGAMO43451 1857 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 KLF18A0A0U1RQI7 1052 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 hCG_1642624A0A1W2PR95 340 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 ATP2A1O14983 1001 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 PPP1R11O60927 126 aaPredicted RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 PGK2P07205 417 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 ALAS1P13196 640 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 PSMA5P28066 241 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 CDC27P30260 824 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 MAPK4P31152 587 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 CCNA1P78396 465 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 ASPRV1Q53RT3 343 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 GPATCH4Q5T3I0 446 aaKnown RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 FBXO46Q6PJ61 603 aaPredicted RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 APOA5Q6Q788 366 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 RUFY3Q7L099 469 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 SGMS1Q86VZ5 419 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 MICU3Q86XE3 530 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 CCAR1Q8IX12 1150 aaKnown RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 SRBD1Q8N5C6 995 aaKnown RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 RAET1EQ8TD07 263 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 BRF1Q92994 677 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 COA7Q96BR5 231 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 ITPKCQ96DU7 683 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 PURBQ96QR8 312 aaKnown RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 KIF2CQ99661 725 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 MTA3Q9BTC8 594 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 TEX13BQ9BXU2 312 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 FLRT1Q9NZU1 646 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 NAP1L2Q9ULW6 460 aaPredicted RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 CTDP1Q9Y5B0 961 aaPredicted RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 SLC12A7Q9Y666 1083 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 DDX49Q9Y6V7 483 aaKnown RBP8.49□□□□□ -1.05
RTN4-212ENST00000461004 WDR19Q8NEZ3 1342 aa8.49□□□□□ -1.05
RTN4-212ENST00000461004 DHX16O60231 1041 aaKnown RBP8.48□□□□□ -1.05
RTN4-212ENST00000461004 ADCY3O60266 1144 aa8.48□□□□□ -1.05
RTN4-212ENST00000461004 PPFIA3O75145 1194 aa8.48□□□□□ -1.05
RTN4-212ENST00000461004 DDAH1O94760 285 aa8.48□□□□□ -1.05
RTN4-212ENST00000461004 HMGB1P09429 215 aaKnown RBP8.48□□□□□ -1.05
RTN4-212ENST00000461004 TIMP2P16035 220 aa8.48□□□□□ -1.05
RTN4-212ENST00000461004 HOXD10P28358 340 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms