RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 C8BP07358 591 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 THBS2P35442 1172 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 SMAD4Q13485 552 aaKnown RBP4.46□□□□□ -1.7
SYPL1-203ENST00000460770 PUM1Q14671 1186 aaKnown RBP eCLIP4.46□□□□□ -1.7
SYPL1-203ENST00000460770 GTF2IRD2BQ6EKJ0 949 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 GTF2IRD2Q86UP8 949 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 METTL16Q86W50 562 aaKnown RBP4.46□□□□□ -1.7
SYPL1-203ENST00000460770 TRIM59Q8IWR1 403 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 CHST13Q8NET6 341 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 PLEKHO2Q8TD55 490 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 ANAPC16Q96DE5 110 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 TRMT2BQ96GJ1 504 aaKnown RBP4.46□□□□□ -1.7
SYPL1-203ENST00000460770 NOX5Q96PH1 765 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 WRNIP1Q96S55 665 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 GORASP1Q9BQQ3 440 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 TGIF2Q9GZN2 237 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 NKX2-4Q9H2Z4 354 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 SPATA6Q9NWH7 488 aaPredicted RBP4.46□□□□□ -1.7
SYPL1-203ENST00000460770 LRP2BPQ9P2M1 347 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 FBLN5Q9UBX5 448 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 ZNF536O15090 1300 aa4.46□□□□□ -1.7
SYPL1-203ENST00000460770 MROH6A6NGR9 719 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 C9orf118A6NHY6 69 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 MAFKO60675 156 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 PPP1R11O60927 126 aaPredicted RBP4.45□□□□□ -1.7
SYPL1-203ENST00000460770 CPP00450 1065 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 HOXC12P31275 282 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 CPZQ66K79 652 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 GLB1LQ6UWU2 654 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 MILR1Q7Z6M3 343 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 TEX2Q8IWB9 1127 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 FAM126BQ8IXS8 530 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 DIO2Q92813 273 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 TMEM169Q96HH4 297 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 LOXL4Q96JB6 756 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 LCORQ96JN0 433 aaPredicted RBP4.45□□□□□ -1.7
SYPL1-203ENST00000460770 GPRC5CQ9NQ84 441 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 APEX2Q9UBZ4 518 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 DUSP10Q9Y6W6 482 aa4.45□□□□□ -1.7
SYPL1-203ENST00000460770 AGRPO00253 132 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 HGSO14964 777 aaPredicted RBP4.44□□□□□ -1.7
SYPL1-203ENST00000460770 MEFVO15553 781 aaPredicted RBP4.44□□□□□ -1.7
SYPL1-203ENST00000460770 ADAM17P78536 824 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 GNL2Q13823 731 aaKnown RBP4.44□□□□□ -1.7
SYPL1-203ENST00000460770 PRAMEF18Q5VWM3 479 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 CEP68Q76N32 757 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 ZNF513Q8N8E2 541 aaPredicted RBP4.44□□□□□ -1.7
SYPL1-203ENST00000460770 CLIC6Q96NY7 704 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 CAPN10Q9HC96 672 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 SIT1Q9Y3P8 196 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 X6R8D5 127 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
SYPL1-203ENST00000460770 H7BY64 318 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 SGSM2O43147 1006 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 DGKIO75912 1065 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 CYP1A1P04798 512 aaPredicted RBP4.43□□□□□ -1.7
SYPL1-203ENST00000460770 SNRPB2P08579 225 aaKnown RBP4.43□□□□□ -1.7
SYPL1-203ENST00000460770 ITGA1P56199 1179 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 HDLBPQ00341 1268 aaKnown RBP4.43□□□□□ -1.7
SYPL1-203ENST00000460770 SV2CQ496J9 727 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 ACBD5Q5T8D3 534 aaPredicted RBP4.43□□□□□ -1.7
SYPL1-203ENST00000460770 Q8N1Y9 231 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 NPLOC4Q8TAT6 608 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 FRS2Q8WU20 508 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 DPF3Q92784 378 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 KISS1RQ969F8 398 aaPredicted RBP4.43□□□□□ -1.7
SYPL1-203ENST00000460770 MRRFQ96E11 262 aaKnown RBP4.43□□□□□ -1.7
SYPL1-203ENST00000460770 TMEM209Q96SK2 561 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 L2HGDHQ9H9P8 463 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 ACTR10Q9NZ32 417 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 ZNF652Q9Y2D9 606 aa4.43□□□□□ -1.7
SYPL1-203ENST00000460770 C1QTNF3-AMACRE9PGA6 284 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 SSBP05455 408 aaKnown RBP eCLIP4.42□□□□□ -1.7
SYPL1-203ENST00000460770 LTBRP36941 435 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 ECI1P42126 302 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 KCNJ6P48051 423 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 FXNQ16595 210 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 TBC1D10BQ4KMP7 808 aaPredicted RBP4.42□□□□□ -1.7
SYPL1-203ENST00000460770 MBLAC2Q68D91 279 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 MCTP2Q6DN12 878 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 TRIM48Q8IWZ4 208 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 TXNDC5Q8NBS9 432 aaKnown RBP4.42□□□□□ -1.7
SYPL1-203ENST00000460770 PHOSPHO1Q8TCT1 267 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 DVL3Q92997 716 aaPredicted RBP4.42□□□□□ -1.7
SYPL1-203ENST00000460770 TOE1Q96GM8 510 aaKnown RBP4.42□□□□□ -1.7
SYPL1-203ENST00000460770 CHAMP1Q96JM3 812 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 MRGPRX3Q96LB0 322 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 CDK5RAP1Q96SZ6 601 aaKnown RBP4.42□□□□□ -1.7
SYPL1-203ENST00000460770 RBM15Q96T37 977 aaKnown RBP eCLIP4.42□□□□□ -1.7
SYPL1-203ENST00000460770 C1QTNF3Q9BXJ4 246 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 TMEM168Q9H0V1 697 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 EPN3Q9H201 632 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 SRRDQ9UH36 339 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 INVSQ9Y283 1065 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 NUB1Q9Y5A7 615 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 PCDHB4Q9Y5E5 795 aa4.42□□□□□ -1.7
SYPL1-203ENST00000460770 DDX3XO00571 662 aaKnown RBP eCLIP4.41□□□□□ -1.7
SYPL1-203ENST00000460770 LAMTOR5O43504 91 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms