RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 CCL23P55773 120 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 PGM5Q15124 567 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 CASC1Q6TDU7 716 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 VSIG10LQ86VR7 867 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 AFG1LQ8WV93 481 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 HERVK_113Q902F9 699 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 TMEM87BQ96K49 555 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 CDX2Q99626 313 aaPredicted RBP13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 CHD9Q3L8U1 2897 aa13.68□□□□□ -0.22
SOX2-OT-201ENST00000460739 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 SH2B2O14492 632 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 RGS20O76081 388 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 FGBP02675 491 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 CYP2C9P11712 490 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 DNAJB2P25686 324 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 KIF5BP33176 963 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 LIFRP42702 1097 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 LAMC2Q13753 1193 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 COL9A3Q14050 684 aaPredicted RBP13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 KCNV1Q6PIU1 500 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 RPUSD2Q8IZ73 545 aaKnown RBP13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 ANO2Q9NQ90 1003 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
SOX2-OT-201ENST00000460739 MYCLP12524 364 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 DGKDQ16760 1214 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 SESTD1Q86VW0 696 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 SKAP1Q86WV1 359 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 IL31RAQ8NI17 732 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 KAT2BQ92831 832 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 VWCEQ96DN2 955 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 SCLYQ96I15 445 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 LZTS2Q9BRK4 669 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 MYL10Q9BUA6 226 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 MTIF3Q9H2K0 278 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 EYSQ5T1H1 3165 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 UNC80Q8N2C7 3258 aa13.66□□□□□ -0.22
SOX2-OT-201ENST00000460739 FRMPD4Q14CM0 1322 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 TRIP12Q14669 1992 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 CCDC69A6NI79 296 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 PFKMP08237 780 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 CALM1P0DP23 149 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 CALM2P0DP24 149 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 CALM3P0DP25 149 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 TGFB3P10600 412 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 HOXD8P13378 290 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 CCND2P30279 289 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 GNAQP50148 359 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 MYSM1Q5VVJ2 828 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 NFXL1Q6ZNB6 911 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 OTOP2Q7RTS6 562 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 FCHSD1Q86WN1 690 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 TIFAQ96CG3 184 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 RRP36Q96EU6 259 aaKnown RBP13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 PBX4Q9BYU1 374 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
SOX2-OT-201ENST00000460739 GRXCR1A8MXD5 290 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 PLEKHA8P1O95397 391 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 RFC2P35250 354 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 PBX2P40425 430 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 CELF3Q5SZQ8 465 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 SGMS1Q86VZ5 419 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 SRBD1Q8N5C6 995 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 PIBF1Q8WXW3 757 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 MYLIPQ8WY64 445 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 SEC63Q9UGP8 760 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-201ENST00000460739 A0A0C4DFX4 3053 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 HAS3O00219 553 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 PIK3CDO00329 1044 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 PPFIA4O75335 1185 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 STAM2O75886 525 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 GGPS1O95749 300 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 F2P00734 622 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 IQCF3P0C7M6 154 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 UBA1P22314 1058 aaKnown RBP13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 PSEN2P49810 448 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 CHMP4BP1P59074 171 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 SP2Q02086 613 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 BFSP2Q13515 415 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 PTGISQ16647 500 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 GDF6Q6KF10 455 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 RETREG2Q8NC44 543 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 INPP4AQ96PE3 977 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 KATNAL1Q9BW62 490 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 ZNF576Q9H609 170 aa13.63□□□□□ -0.23
SOX2-OT-201ENST00000460739 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms