RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 ZDHHC15Q96MV8 337 aa5.04□□□□□ -1.6
RFC4-211ENST00000460408 AURKAO14965 403 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 DLX3O60479 287 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 CDC45O75419 566 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 PABPC1P11940 636 aaKnown RBP5.03□□□□□ -1.6
RFC4-211ENST00000460408 VAV1P15498 845 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 PFKLP17858 780 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 MAPKAPK2P49137 400 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 GFRA1P56159 465 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 AMPD2Q01433 879 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 PUM1Q14671 1186 aaKnown RBP eCLIP5.03□□□□□ -1.6
RFC4-211ENST00000460408 NR1I3Q14994 352 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 SF1Q15637 639 aaKnown RBP5.03□□□□□ -1.6
RFC4-211ENST00000460408 PLEKHN1Q494U1 663 aaPredicted RBP5.03□□□□□ -1.6
RFC4-211ENST00000460408 RTP2Q5QGT7 225 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 KIAA0907Q7Z7F0 614 aaPredicted RBP5.03□□□□□ -1.6
RFC4-211ENST00000460408 HOMER1Q86YM7 354 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 NUP43Q8NFH3 380 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 COPS5Q92905 334 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 SLC12A9Q9BXP2 914 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 CYP26B1Q9NR63 512 aa5.03□□□□□ -1.6
RFC4-211ENST00000460408 CCDC163A0A0D9SF12 145 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 K7ESM1 405 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 IFNGR1P15260 489 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 CANXP27824 592 aaKnown RBP5.02□□□□□ -1.61
RFC4-211ENST00000460408 HOXC12P31275 282 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 L1CAMP32004 1257 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 LIMS1P48059 325 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 POU4F1Q01851 419 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 MAP4K2Q12851 820 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 TKFCQ3LXA3 575 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 VWA3BQ502W6 1294 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 FAM209AQ5JX71 171 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 SLC35F1Q5T1Q4 408 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 CWF19L1Q69YN2 538 aaKnown RBP5.02□□□□□ -1.61
RFC4-211ENST00000460408 ZC3H14Q6PJT7 736 aaKnown RBP5.02□□□□□ -1.61
RFC4-211ENST00000460408 ZNF662Q6ZS27 426 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 C16orf86Q6ZW13 317 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 SCUBE1Q8IWY4 988 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 TMEM52Q8NDY8 209 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 FCRL3Q96P31 734 aaPredicted RBP5.02□□□□□ -1.61
RFC4-211ENST00000460408 IER2Q9BTL4 223 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 DHRS4Q9BTZ2 278 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 IMPACTQ9P2X3 320 aa5.02□□□□□ -1.61
RFC4-211ENST00000460408 MRPS23Q9Y3D9 190 aaKnown RBP5.02□□□□□ -1.61
RFC4-211ENST00000460408 TRBV23-1A0A0A0MS06 115 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 STXBP3O00186 592 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 PPP1R12AO14974 1030 aaPredicted RBP5.01□□□□□ -1.61
RFC4-211ENST00000460408 PRODHO43272 600 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 CD3EP07766 207 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 C6orf222P0C671 652 aaPredicted RBP5.01□□□□□ -1.61
RFC4-211ENST00000460408 MSL3P1P0C860 447 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 FBLN1P23142 703 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 ZNF200P98182 395 aaPredicted RBP5.01□□□□□ -1.61
RFC4-211ENST00000460408 SCRN1Q12765 414 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 TARBP2Q15633 366 aaKnown RBP5.01□□□□□ -1.61
RFC4-211ENST00000460408 DPY19L1Q2PZI1 675 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 UBXN11Q5T124 520 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 DENND5AQ6IQ26 1287 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 RCSD1Q6JBY9 416 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 NSMFQ6X4W1 530 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 LIPIQ6XZB0 460 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 SYNPOQ8N3V7 929 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 TMEM145Q8NBT3 493 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 KREMEN2Q8NCW0 462 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 CCDC140Q96MF4 163 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 JMJD8Q96S16 334 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 GPR20Q99678 358 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 CDADC1Q9BWV3 514 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 NCOA5Q9HCD5 579 aaKnown RBP5.01□□□□□ -1.61
RFC4-211ENST00000460408 BACE2Q9Y5Z0 518 aa5.01□□□□□ -1.61
RFC4-211ENST00000460408 ARNTLO00327 626 aa5□□□□□ -1.61
RFC4-211ENST00000460408 ASMTLO95671 621 aa5□□□□□ -1.61
RFC4-211ENST00000460408 PLA2G1BP04054 148 aaKnown RBP5□□□□□ -1.61
RFC4-211ENST00000460408 SNRPB2P08579 225 aaKnown RBP5□□□□□ -1.61
RFC4-211ENST00000460408 MVKQ03426 396 aa5□□□□□ -1.61
RFC4-211ENST00000460408 TESK1Q15569 626 aa5□□□□□ -1.61
RFC4-211ENST00000460408 NTRK3Q16288 839 aa5□□□□□ -1.61
RFC4-211ENST00000460408 PRSS53Q2L4Q9 553 aa5□□□□□ -1.61
RFC4-211ENST00000460408 NPLOC4Q8TAT6 608 aa5□□□□□ -1.61
RFC4-211ENST00000460408 FNIP1Q8TF40 1166 aa5□□□□□ -1.61
RFC4-211ENST00000460408 FRS2Q8WU20 508 aa5□□□□□ -1.61
RFC4-211ENST00000460408 FEZ1Q99689 392 aa5□□□□□ -1.61
RFC4-211ENST00000460408 CDC6Q99741 560 aa5□□□□□ -1.61
RFC4-211ENST00000460408 AP5S1Q9NUS5 200 aa5□□□□□ -1.61
RFC4-211ENST00000460408 PALD1Q9ULE6 856 aa5□□□□□ -1.61
RFC4-211ENST00000460408 SBNO2Q9Y2G9 1366 aa5□□□□□ -1.61
RFC4-211ENST00000460408 SH3D21A4FU49 640 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 C2orf71A6NGG8 1288 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 FGF10O15520 208 aaPredicted RBP4.99□□□□□ -1.61
RFC4-211ENST00000460408 SRGAP3O43295 1099 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 KCNQ2O43526 872 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 CPP00450 1065 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 THBDP07204 575 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 MAGEA10P43363 369 aaPredicted RBP4.99□□□□□ -1.61
RFC4-211ENST00000460408 NOP2P46087 812 aaKnown RBP4.99□□□□□ -1.61
RFC4-211ENST00000460408 SUMO1P63165 101 aaKnown RBP4.99□□□□□ -1.61
RFC4-211ENST00000460408 HTRA3P83110 453 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 FOXO4P98177 505 aa4.99□□□□□ -1.61
RFC4-211ENST00000460408 TCEA2Q15560 299 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms