RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 EGFLAMQ63HQ2 1017 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 MAMDC2Q7Z304 686 aaPredicted RBP4.86□□□□□ -1.63
VPS8-215ENST00000460158 IFNL3Q8IZI9 196 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 SYNPOQ8N3V7 929 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 GSTCDQ8NEC7 633 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 NLGN2Q8NFZ4 835 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 ZFYVE21Q9BQ24 234 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 KRTAP4-5Q9BYR2 181 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 MARCH2Q9P0N8 246 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 FBLN5Q9UBX5 448 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 SFMBT1Q9UHJ3 866 aa4.86□□□□□ -1.63
VPS8-215ENST00000460158 TIMM13Q9Y5L4 95 aaPredicted RBP4.86□□□□□ -1.63
VPS8-215ENST00000460158 TCAF2A6NFQ2 919 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 B8ZZF3 427 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 KCNQ2O43526 872 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 MYO1BO43795 1136 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 CRTAMO95727 393 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 FUCA1P04066 466 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 TACR1P25103 407 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 CORO7P57737 925 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 GPR85P60893 370 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 CYP4F8P98187 520 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 PABPC4Q13310 644 aaKnown RBP eCLIP4.85□□□□□ -1.63
VPS8-215ENST00000460158 LSAMPQ13449 338 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 SNX17Q15036 470 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 FNDC3BQ53EP0 1204 aaKnown RBP4.85□□□□□ -1.63
VPS8-215ENST00000460158 CIAPIN1Q6FI81 312 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 LBX2Q6XYB7 198 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 ATG14Q6ZNE5 492 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 CEP68Q76N32 757 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 BRAPQ7Z569 592 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 FGD2Q7Z6J4 655 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 NLRP10Q86W26 655 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 TEX2Q8IWB9 1127 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 SCLYQ96I15 445 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 CHAMP1Q96JM3 812 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 FEZ1Q99689 392 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 MTA3Q9BTC8 594 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 TRIM39Q9HCM9 518 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 PDLIM7Q9NR12 457 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 PPARGC1AQ9UBK2 798 aaKnown RBP4.85□□□□□ -1.63
VPS8-215ENST00000460158 PCDHA9Q9Y5H5 950 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 PCDHA8Q9Y5H6 950 aa4.85□□□□□ -1.63
VPS8-215ENST00000460158 AQP7O14520 342 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 EFCAB14O75071 495 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 RFPL3O75679 317 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 RASGRP1O95267 797 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 PNLIPP16233 465 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 SDSP20132 328 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 FPR2P25090 351 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 GYS2P54840 703 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 GUCY1A3Q02108 690 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 DALRD3Q5D0E6 543 aaKnown RBP4.84□□□□□ -1.63
VPS8-215ENST00000460158 MTDHQ86UE4 582 aaKnown RBP4.84□□□□□ -1.63
VPS8-215ENST00000460158 FAM177A1Q8N128 213 aaPredicted RBP4.84□□□□□ -1.63
VPS8-215ENST00000460158 LZTR1Q8N653 840 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.84□□□□□ -1.63
VPS8-215ENST00000460158 PLEKHO2Q8TD55 490 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 USP33Q8TEY7 942 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 TMEM169Q96HH4 297 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 CDIP1Q9H305 208 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 CLDND1Q9NY35 253 aa4.84□□□□□ -1.63
VPS8-215ENST00000460158 YBX2Q9Y2T7 364 aaKnown RBP4.84□□□□□ -1.63
VPS8-215ENST00000460158 C22orf46C9J442 243 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 ETV2O00321 342 aaPredicted RBP4.83□□□□□ -1.64
VPS8-215ENST00000460158 DNAJC8O75937 253 aaPredicted RBP4.83□□□□□ -1.64
VPS8-215ENST00000460158 SDHBP21912 280 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 GTF2A2P52657 109 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 KIZQ2M2Z5 673 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 BICRALQ6AI39 1079 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 ZNF662Q6ZS27 426 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 DHX37Q8IY37 1157 aaKnown RBP4.83□□□□□ -1.64
VPS8-215ENST00000460158 KCNN1Q92952 543 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 NINJ1Q92982 152 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 TRMT2BQ96GJ1 504 aaKnown RBP4.83□□□□□ -1.64
VPS8-215ENST00000460158 MAGEB10Q96LZ2 347 aaPredicted RBP4.83□□□□□ -1.64
VPS8-215ENST00000460158 CRTAC1Q9NQ79 661 aa4.83□□□□□ -1.64
VPS8-215ENST00000460158 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.83□□□□□ -1.64
VPS8-215ENST00000460158 SMG5Q9UPR3 1016 aaKnown RBP4.83□□□□□ -1.64
VPS8-215ENST00000460158 SBNO2Q9Y2G9 1366 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 A0A1W2PQJ5 194 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 TCRBV16S1A1N1A0A5B0 115 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 ARVCFO00192 962 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 IRS4O14654 1257 aaPredicted RBP4.82□□□□□ -1.64
VPS8-215ENST00000460158 CLSTN1O94985 981 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 SOD2P04179 222 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 INHBBP09529 407 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 SRGAP2CP0DJJ0 459 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 ARL4AP40617 200 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 PAK1Q13153 545 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 NIM1KQ8IY84 436 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 Q8N1Y9 231 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 INTS4Q96HW7 963 aaKnown RBP4.82□□□□□ -1.64
VPS8-215ENST00000460158 ALG1Q9BT22 464 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 JAM3Q9BX67 310 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 IPPKQ9H8X2 491 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 TNFRSF12AQ9NP84 129 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 X6R8D5 127 aa4.82□□□□□ -1.64
VPS8-215ENST00000460158 H7BY64 318 aa4.81□□□□□ -1.64
VPS8-215ENST00000460158 NTRK1P04629 796 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms