RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 RAD50Q92878 1312 aa17.65■□□□□ 0.42
LMNA-209ENST00000459904 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
LMNA-209ENST00000459904 WDR5P61964 334 aaKnown RBP17.64■□□□□ 0.41
LMNA-209ENST00000459904 STAG2Q8N3U4 1231 aa17.64■□□□□ 0.41
LMNA-209ENST00000459904 KHSRPQ92945 711 aaKnown RBP eCLIP17.64■□□□□ 0.41
LMNA-209ENST00000459904 TTC14Q96N46 770 aa17.64■□□□□ 0.41
LMNA-209ENST00000459904 SLC9A7Q96T83 725 aa17.64■□□□□ 0.41
LMNA-209ENST00000459904 LOC102724159A0A0B4J2E5 919 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 PITPNM1O00562 1244 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 OPLAHO14841 1288 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 GTPBP6O43824 516 aaPredicted RBP17.63■□□□□ 0.41
LMNA-209ENST00000459904 TLL1O43897 1013 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 LPXNO60711 386 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 NBNO60934 754 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 CFBP00751 764 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 GH1P01241 217 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 BFSP2Q13515 415 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 PWP2Q15269 919 aaKnown RBP17.63■□□□□ 0.41
LMNA-209ENST00000459904 ENAHQ8N8S7 591 aaPredicted RBP17.63■□□□□ 0.41
LMNA-209ENST00000459904 ESR2Q92731 530 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 RMDN3Q96TC7 470 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 IL25Q9H293 177 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 TSPYL2Q9H2G4 693 aaPredicted RBP17.63■□□□□ 0.41
LMNA-209ENST00000459904 EPHX3Q9H6B9 360 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 ZSWIM5Q9P217 1185 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 ZMYM6O95789 1325 aa17.63■□□□□ 0.41
LMNA-209ENST00000459904 ZNF213O14771 459 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 KPNA6O60684 536 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 IGHDP01880 384 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 RFC2P35250 354 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 PSEN2P49810 448 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 HDAC1Q13547 482 aaPredicted RBP17.62■□□□□ 0.41
LMNA-209ENST00000459904 GPATCH4Q5T3I0 446 aaKnown RBP17.62■□□□□ 0.41
LMNA-209ENST00000459904 ARHGEF16Q5VV41 709 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 LRRC8DQ7L1W4 858 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 GPKOWQ92917 476 aaPredicted RBP eCLIP17.62■□□□□ 0.41
LMNA-209ENST00000459904 OSBPL7Q9BZF2 842 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 BCAS3Q9H6U6 928 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 JMJD4Q9H9V9 463 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 ABCB11O95342 1321 aa17.62■□□□□ 0.41
LMNA-209ENST00000459904 LOXHD1Q8IVV2 1947 aa17.61■□□□□ 0.41
LMNA-209ENST00000459904 PPP1R11O60927 126 aaPredicted RBP17.61■□□□□ 0.41
LMNA-209ENST00000459904 CKBP12277 381 aa17.61■□□□□ 0.41
LMNA-209ENST00000459904 MYCLP12524 364 aaPredicted RBP17.61■□□□□ 0.41
LMNA-209ENST00000459904 KCNJ6P48051 423 aa17.61■□□□□ 0.41
LMNA-209ENST00000459904 PTPN11Q06124 597 aaPredicted RBP17.61■□□□□ 0.41
LMNA-209ENST00000459904 STXBP2Q15833 593 aa17.61■□□□□ 0.41
LMNA-209ENST00000459904 FBXO11Q86XK2 927 aa17.61■□□□□ 0.41
LMNA-209ENST00000459904 IL31RAQ8NI17 732 aa17.61■□□□□ 0.41
LMNA-209ENST00000459904 NSUN6Q8TEA1 469 aaKnown RBP17.61■□□□□ 0.41
LMNA-209ENST00000459904 ZSCAN10Q96SZ4 725 aaPredicted RBP17.61■□□□□ 0.41
LMNA-209ENST00000459904 MPHOSPH6Q99547 160 aaKnown RBP17.61■□□□□ 0.41
LMNA-209ENST00000459904 ZBED2Q9BTP6 218 aa17.61■□□□□ 0.41
LMNA-209ENST00000459904 DDX41Q9UJV9 622 aaKnown RBP17.61■□□□□ 0.41
LMNA-209ENST00000459904 RGS20O76081 388 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 SELPP16109 830 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 HOXA13P31271 388 aaPredicted RBP17.6■□□□□ 0.41
LMNA-209ENST00000459904 MBTPS1Q14703 1052 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 MFSD10Q14728 455 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 SLC35G1Q2M3R5 365 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 ZNF618Q5T7W0 954 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 TRAF7Q6Q0C0 670 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.6■□□□□ 0.41
LMNA-209ENST00000459904 DGKHQ86XP1 1220 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 PHOSPHO2Q8TCD6 241 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 RNF41Q9H4P4 317 aaPredicted RBP17.6■□□□□ 0.41
LMNA-209ENST00000459904 PXMP2Q9NR77 195 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 GTF2IRD1Q9UHL9 959 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 C5orf42Q9H799 3197 aa17.6■□□□□ 0.41
LMNA-209ENST00000459904 KIF28PB7ZC32 967 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 NR3C2P08235 984 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 PARP1P09874 1014 aaKnown RBP17.59■□□□□ 0.41
LMNA-209ENST00000459904 POU3F3P20264 500 aaPredicted RBP17.59■□□□□ 0.41
LMNA-209ENST00000459904 CASTP20810 708 aaKnown RBP17.59■□□□□ 0.41
LMNA-209ENST00000459904 SP2Q02086 613 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 KIAA0753Q2KHM9 967 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 TRIM71Q2Q1W2 868 aaKnown RBP17.59■□□□□ 0.41
LMNA-209ENST00000459904 CYB5R4Q7L1T6 521 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 IQCA1Q86XH1 822 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 AFAP1L1Q8TED9 768 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 TELO2Q9Y4R8 837 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 MRVI1Q9Y6F6 885 aa17.59■□□□□ 0.41
LMNA-209ENST00000459904 FAM86C2PA6NEL3 165 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 B4DLN1 442 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 MRPL12P52815 198 aaKnown RBP17.58■□□□□ 0.4
LMNA-209ENST00000459904 DGKDQ16760 1214 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 CNKSR3Q6P9H4 555 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 DHX37Q8IY37 1157 aaKnown RBP17.58■□□□□ 0.4
LMNA-209ENST00000459904 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 CAGE1Q8TC20 777 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 SENP2Q9HC62 589 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 CD320Q9NPF0 282 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 DIAPH3Q9NSV4 1193 aa17.58■□□□□ 0.4
LMNA-209ENST00000459904 MRPL11Q9Y3B7 192 aaKnown RBP17.58■□□□□ 0.4
LMNA-209ENST00000459904 BAIAP3O94812 1187 aa17.57■□□□□ 0.4
LMNA-209ENST00000459904 PCP11498 1178 aaKnown RBP17.57■□□□□ 0.4
LMNA-209ENST00000459904 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms