RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ATP6V0A2Q9Y487 856 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 LTBP1Q14766 1721 aa9.82□□□□□ -0.84
HDAC3-202ENST00000459727 A6NNZ2 444 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 USP17L5A8MUK1 530 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 C6orf229H3BNL8 230 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 ONECUT3O60422 494 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 FOSP01100 380 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 IVLP07476 585 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 GOLGA8HP0CJ92 632 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 GYS1P13807 737 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 CDC25AP30304 524 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 ALDH1B1P30837 517 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 USP14P54578 494 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MARSP56192 900 aaKnown RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 HERVK_113P62684 666 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 EHHADHQ08426 723 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 STK4Q13043 487 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MAPK8IP2Q13387 824 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 EDRF1Q3B7T1 1238 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 TUBB8Q3ZCM7 444 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MUM1L1Q5H9M0 696 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MIIPQ5JXC2 388 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 C10orf76Q5T2E6 689 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 WDR59Q6PJI9 974 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 KIAA0895Q8NCT3 520 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 TEKT1Q969V4 418 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MTMR8Q96EF0 704 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 CHP1Q99653 195 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MMTAG2Q9BU76 263 aaKnown RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MXD3Q9BW11 206 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 IFIH1Q9BYX4 1025 aaKnown RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 IRX2Q9BZI1 471 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 ZC3H12CQ9C0D7 883 aaKnown RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 CEP72Q9P209 647 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 BIN2Q9UBW5 565 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 JAG2Q9Y219 1238 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 REXO2Q9Y3B8 237 aaKnown RBP9.81□□□□□ -0.84
HDAC3-202ENST00000459727 DAAM1Q9Y4D1 1078 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 COL4A3BPQ9Y5P4 624 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 MYH1P12882 1939 aa9.81□□□□□ -0.84
HDAC3-202ENST00000459727 CYP3A7-CYP3A51PA0A087WV96 503 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 MYMKA6NI61 221 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 PJA2O43164 708 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 AKR1B10O60218 316 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 SEC31AO94979 1220 aaKnown RBP9.8□□□□□ -0.84
HDAC3-202ENST00000459727 IDEP14735 1019 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 NPR1P16066 1061 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 CYP3A7P24462 503 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 PAFAH1B1P43034 410 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 TNNI2P48788 182 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 KCNQ4P56696 695 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 CASP8Q14790 479 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 IFI16Q16666 785 aaKnown RBP9.8□□□□□ -0.84
HDAC3-202ENST00000459727 CCDC96Q2M329 555 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 SLC4A8Q2Y0W8 1093 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 SLC9C1Q4G0N8 1177 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 GLE1Q53GS7 698 aaKnown RBP9.8□□□□□ -0.84
HDAC3-202ENST00000459727 FAM26FQ5R3K3 315 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 DPP8Q6V1X1 898 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-202ENST00000459727 LEKR1Q6ZMV7 388 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 CACNA2D4Q7Z3S7 1137 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 DDX12PQ92771 950 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 GJD4Q96KN9 370 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-202ENST00000459727 TRIM34Q9BYJ4 488 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 SH2D4AQ9H788 454 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 PSTPIP2Q9H939 334 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 KANSL2Q9H9L4 492 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 BLOC1S4Q9NUP1 217 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 NYAP2Q9P242 653 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 ZHX1Q9UKY1 873 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-202ENST00000459727 SNX12Q9UMY4 172 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 PCDHA12Q9UN75 941 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 MTMR7Q9Y216 660 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 SIK3Q9Y2K2 1263 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 HYOU1Q9Y4L1 999 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 BZW2Q9Y6E2 419 aaKnown RBP9.8□□□□□ -0.84
HDAC3-202ENST00000459727 CDK5RAP2Q96SN8 1893 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 AFF2P51816 1311 aa9.8□□□□□ -0.84
HDAC3-202ENST00000459727 COL2A1P02458 1487 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-202ENST00000459727 UBR3Q6ZT12 1888 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 A0A0U1RQG5 324 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-202ENST00000459727 G3V3G9 751 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 RBAK-RBAKDNI3L0D1 243 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 ADAMTS3O15072 1205 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 SASH3O75995 380 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 SERPING1P05155 500 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 PDE6BP35913 854 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 EPS15P42566 896 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 AARSP49588 968 aaKnown RBP eCLIP9.79□□□□□ -0.84
HDAC3-202ENST00000459727 KIF11P52732 1056 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 GTF2IP78347 998 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 MCM6Q14566 821 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 GRIK5Q16478 980 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 CCDC40Q4G0X9 1142 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 ZCWPW2Q504Y3 356 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 DCAF8Q5TAQ9 597 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 LRRC55Q6ZSA7 311 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 ADGRF4Q8IZF3 695 aa9.79□□□□□ -0.84
HDAC3-202ENST00000459727 MMGT1Q8N4V1 131 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms