RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 IFNL3Q8IZI9 196 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 LILRB2Q8N423 598 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 ZSWIM2Q8NEG5 633 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 MZB1Q8WU39 189 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 SEC14L1Q92503 715 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 PTPRN2Q92932 1015 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 KISS1RQ969F8 398 aaPredicted RBP4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 EXOC2Q96KP1 924 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 AP5M1Q9H0R1 490 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 RXFP1Q9HBX9 757 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 CLDND1Q9NY35 253 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 FBXL7Q9UJT9 491 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 PCDHA5Q9Y5H7 936 aa4.56□□□□□ -1.68
SCARNA18-201ENST00000459004 BLACEA4D250 179 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 DBX1A6NMT0 343 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 AQP7O14520 342 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 SGSM2O43147 1006 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 PFKLP17858 780 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 SLC6A11P48066 632 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 GABREP78334 506 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 ZNF200P98182 395 aaPredicted RBP4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 TARBP2Q15633 366 aaKnown RBP4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 KIZQ2M2Z5 673 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 C2orf27AQ580R0 203 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 MAMDC2Q7Z304 686 aaPredicted RBP4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 ALG3Q92685 438 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 CD320Q9NPF0 282 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 MRPS23Q9Y3D9 190 aaKnown RBP4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 SIT1Q9Y3P8 196 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 HCFC2Q9Y5Z7 792 aa4.55□□□□□ -1.68
SCARNA18-201ENST00000459004 BUB1BO60566 1050 aaPredicted RBP4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 DGKIO75912 1065 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 C6orf222P0C671 652 aaPredicted RBP4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 NCAM1P13591 858 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 FBLN1P23142 703 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 EPHB3P54753 998 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 CHRNA2Q15822 529 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 KCNA10Q16322 511 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 IGDCC3Q8IVU1 814 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 SIGLEC10Q96LC7 697 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 TOX2Q96NM4 488 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 RNF38Q9H0F5 515 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 CDIP1Q9H305 208 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 EPB41L1Q9H4G0 881 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 USP35Q9P2H5 1018 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 CNOT6Q9ULM6 557 aaKnown RBP4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 TRAF6Q9Y4K3 522 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 IRAK3Q9Y616 596 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 ASXL2Q76L83 1435 aa4.54□□□□□ -1.68
SCARNA18-201ENST00000459004 FAM47E-STBD1D6RA91 191 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 NPIPB6E9PJ23 425 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 IRS4O14654 1257 aaPredicted RBP4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 HGSO14964 777 aaPredicted RBP4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 NAT1P18440 290 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 GRK2P25098 689 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 GRK3P35626 688 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 NCKAP1LP55160 1127 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 ZNF385BQ569K4 471 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 EMC4Q5J8M3 183 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 ALG1Q9BT22 464 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 JAM3Q9BX67 310 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 PIF1Q9H611 641 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 PPARGC1AQ9UBK2 798 aaKnown RBP4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 ZNF652Q9Y2D9 606 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 KCTD3Q9Y597 815 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 PTCH2Q9Y6C5 1203 aa4.53□□□□□ -1.68
SCARNA18-201ENST00000459004 RFXAPO00287 272 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 KRIT1O00522 736 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 MAFKO60675 156 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 EFCAB14O75071 495 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 TADA3O75528 432 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 SOD2P04179 222 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 ASGR2P07307 311 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 IGFBP6P24592 240 aaPredicted RBP4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 PMLP29590 882 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 RANGAP1P46060 587 aaPredicted RBP4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 LINC00310P59036 64 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 STEAP3Q658P3 488 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 CYP4F22Q6NT55 531 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 MILR1Q7Z6M3 343 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 MTDHQ86UE4 582 aaKnown RBP4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 AMIGO3Q86WK7 504 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 KRTAP19-1Q8IUB9 90 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 CILP2Q8IUL8 1156 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 TMEFF1Q8IYR6 380 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 ZSCAN18Q8TBC5 510 aaPredicted RBP4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 CPA5Q8WXQ8 436 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 MRPL4Q9BYD3 311 aaKnown RBP4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 SMOC1Q9H4F8 434 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 BCAS3Q9H6U6 928 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 SLC6A20Q9NP91 592 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 PALD1Q9ULE6 856 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 PLA2G2DQ9UNK4 145 aa4.52□□□□□ -1.69
SCARNA18-201ENST00000459004 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
SCARNA18-201ENST00000459004 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.51□□□□□ -1.69
SCARNA18-201ENST00000459004 APPP05067 770 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms