RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 LRRC15Q8TF66 581 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 AK8Q96MA6 479 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 GDAP1L1Q96MZ0 367 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 C7orf25Q9BPX7 421 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 LRRC1Q9BTT6 524 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 CAPS2Q9BXY5 557 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 LRWD1Q9UFC0 647 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 ABCF2Q9UG63 623 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 DMGDHQ9UI17 866 aaKnown RBP9.44□□□□□ -0.9
VPS50-208ENST00000458707 CAPN6Q9Y6Q1 641 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 ABCB11O95342 1321 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 MACROD2A1Z1Q3 448 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 USP17L12C9JPN9 530 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 USP17L21D6R901 530 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 EBAG9O00559 213 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 NMT2O60551 498 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 CYP27A1Q02318 531 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 UBE4AQ14139 1066 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 SBK1Q52WX2 424 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 GLE1Q53GS7 698 aaKnown RBP9.43□□□□□ -0.9
VPS50-208ENST00000458707 EMC10Q5UCC4 262 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 MMS22LQ6ZRQ5 1243 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 SND1Q7KZF4 910 aaKnown RBP eCLIP9.43□□□□□ -0.9
VPS50-208ENST00000458707 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 ANKS1AQ92625 1134 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 MKL1Q969V6 931 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 CCDC47Q96A33 483 aaKnown RBP9.43□□□□□ -0.9
VPS50-208ENST00000458707 CCDC42Q96M95 316 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 OSBPL9Q96SU4 736 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 IFIH1Q9BYX4 1025 aaKnown RBP9.43□□□□□ -0.9
VPS50-208ENST00000458707 TRIM9Q9C026 710 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 TMEM60Q9H2L4 133 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 STIM2Q9P246 746 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 ARHGAP20Q9P2F6 1191 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 HYOU1Q9Y4L1 999 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 PCDHA13Q9Y5I0 950 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 SPATA31A6Q5VVP1 1343 aa9.43□□□□□ -0.9
VPS50-208ENST00000458707 COL14A1Q05707 1796 aaKnown RBP9.43□□□□□ -0.9
VPS50-208ENST00000458707 CCDC194A0A1B0GVG4 234 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 PP2D1A8MPX8 630 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 ANKRD65E5RJM6 399 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 NTSR2O95665 410 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 MTIF2P46199 727 aaKnown RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 CCT5P48643 541 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 EVA1CP58658 441 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 EZH2Q15910 746 aaKnown RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 FKBP15Q5T1M5 1219 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 HAUS3Q68CZ6 603 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 HDAC7Q8WUI4 952 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 RRP36Q96EU6 259 aaKnown RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 NOC4LQ9BVI4 516 aaKnown RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 DCP1AQ9NPI6 582 aaPredicted RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 ATP8A2Q9NTI2 1148 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 PCDHA6Q9UN73 950 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 SIK3Q9Y2K2 1263 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 FAM169AQ9Y6X4 670 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 ZEB2O60315 1214 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 PLEKP08567 350 aaPredicted RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 GYG1P46976 350 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 KIF11P52732 1056 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 PDE4DQ08499 809 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 STK4Q13043 487 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 GRM4Q14833 912 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 CCDC96Q2M329 555 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 CENPPQ6IPU0 288 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 ARHGAP27Q6ZUM4 889 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 KRT26Q7Z3Y9 468 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 DGKHQ86XP1 1220 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 BCAS4Q8TDM0 211 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 SMCR8Q8TEV9 937 aaPredicted RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 NSUN4Q96CB9 384 aaKnown RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 ALS2CR12Q96Q35 445 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 CXorf56Q9H5V9 222 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 ARPP21Q9UBL0 812 aaPredicted RBP9.42□□□□□ -0.9
VPS50-208ENST00000458707 RNF14Q9UBS8 474 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
VPS50-208ENST00000458707 DDX60LQ5H9U9 1706 aaKnown RBP9.41□□□□□ -0.9
VPS50-208ENST00000458707 SHTN1A0MZ66 631 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 ERLIN2O94905 339 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 MOCS3O95396 460 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 PLCG1P19174 1290 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 HOXA7P31268 230 aaPredicted RBP9.41□□□□□ -0.9
VPS50-208ENST00000458707 GNAQP50148 359 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 GNGT1P63211 74 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 APBA1Q02410 837 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 MTA1Q13330 715 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 ASTE1Q2TB18 679 aaPredicted RBP9.41□□□□□ -0.9
VPS50-208ENST00000458707 VWA3BQ502W6 1294 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 TTMPQ5BVD1 217 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 FAM47AQ5JRC9 791 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 FOXR2Q6PJQ5 311 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 ANKRD23Q86SG2 305 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 SPATS2Q86XZ4 545 aaKnown RBP9.41□□□□□ -0.9
VPS50-208ENST00000458707 ANKRD18AQ8IVF6 992 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 MICALL1Q8N3F8 863 aa9.41□□□□□ -0.9
VPS50-208ENST00000458707 MREGQ8N565 214 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms