RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 STARD7Q9NQZ5 370 aa18.55■□□□□ 0.56
CD28-203ENST00000458610 A0A1W2PQ45 241 aaPredicted RBP18.54■□□□□ 0.56
CD28-203ENST00000458610 A0A1W2PQY0 241 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 SMCO2A6NFE2 343 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 SSRP1Q08945 709 aaKnown RBP18.54■□□□□ 0.56
CD28-203ENST00000458610 NTRK3Q16288 839 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 LRRC26Q2I0M4 334 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 IL27Q8NEV9 243 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 OR6J1Q8NGC5 347 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 SLC26A6Q9BXS9 759 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 C6orf50Q9HD87 102 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 POLR3EQ9NVU0 708 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 MRVI1Q9Y6F6 885 aa18.54■□□□□ 0.56
CD28-203ENST00000458610 H0YGN5 161 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 STXBP3O00186 592 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 GH1P01241 217 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 GNA11P29992 359 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 PCNX4Q63HM2 1172 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 CCDC62Q6P9F0 684 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 NLRX1Q86UT6 975 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 C7orf61Q8IZ16 206 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 PRKAG2Q9UGJ0 569 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 MCM3APO60318 1980 aa18.53■□□□□ 0.56
CD28-203ENST00000458610 FRMPD4Q14CM0 1322 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 ESYT2A0FGR8 921 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 MYADML2A6NDP7 307 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 CTAGE5O15320 804 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 AK2P54819 239 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 RTP1P59025 263 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 BEX3Q00994 111 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 STK3Q13188 491 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 LAMC2Q13753 1193 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 SNX17Q15036 470 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 FAM177A1Q8N128 213 aaPredicted RBP18.52■□□□□ 0.56
CD28-203ENST00000458610 BICD2Q8TD16 824 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 PHKBQ93100 1093 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
CD28-203ENST00000458610 C22orf23Q9BZE7 217 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 NCOA5Q9HCD5 579 aaKnown RBP18.52■□□□□ 0.56
CD28-203ENST00000458610 SH3GLB2Q9NR46 395 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 DDX41Q9UJV9 622 aaKnown RBP18.52■□□□□ 0.56
CD28-203ENST00000458610 PCDHA6Q9UN73 950 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 ATP11BQ9Y2G3 1177 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 PCDHA8Q9Y5H6 950 aa18.52■□□□□ 0.56
CD28-203ENST00000458610 CENPFP49454 3210 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 MROH7Q68CQ1 1323 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 PDE4DIPQ5VU43 2346 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 A0A0U1RQG5 324 aaPredicted RBP18.51■□□□□ 0.55
CD28-203ENST00000458610 PFKFB2O60825 505 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 DEXIO95424 95 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 AP3B2Q13367 1082 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 DHX37Q8IY37 1157 aaKnown RBP18.51■□□□□ 0.55
CD28-203ENST00000458610 CDHR1Q96JP9 859 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 TPCN1Q9ULQ1 816 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 FRMPD3Q5JV73 1810 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 LCTP09848 1927 aa18.51■□□□□ 0.55
CD28-203ENST00000458610 A6NJR5 290 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 DCDC2CA8MYV0 355 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 MAFGO15525 162 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 ICAM3P32942 547 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 PKN1Q16512 942 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 UBE2SQ16763 222 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 LY6KQ17RY6 165 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 CXCL17Q6UXB2 119 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 TOX2Q96NM4 488 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 ZMYND12Q9H0C1 365 aa18.5■□□□□ 0.55
CD28-203ENST00000458610 ARVCFO00192 962 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 FIBPO43427 364 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 ARIH2O95376 493 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 MYL3P08590 195 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 NEDD9Q14511 834 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 TRIM60Q495X7 471 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 TMEM63BQ5T3F8 832 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 TYW1BQ6NUM6 668 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 GIMAP8Q8ND71 665 aaPredicted RBP18.49■□□□□ 0.55
CD28-203ENST00000458610 IL31RAQ8NI17 732 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 EMID1Q96A84 441 aaPredicted RBP18.49■□□□□ 0.55
CD28-203ENST00000458610 INPP4AQ96PE3 977 aaPredicted RBP18.49■□□□□ 0.55
CD28-203ENST00000458610 MTG1Q9BT17 334 aaPredicted RBP18.49■□□□□ 0.55
CD28-203ENST00000458610 RTEL1Q9NZ71 1219 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 GTF3C3Q9Y5Q9 886 aa18.49■□□□□ 0.55
CD28-203ENST00000458610 SPATA31C2B4DYI2 1134 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 TLR3O15455 904 aaKnown RBP18.48■□□□□ 0.55
CD28-203ENST00000458610 RGS20O76081 388 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 XBP1P17861 261 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 RBM25P49756 843 aaKnown RBP18.48■□□□□ 0.55
CD28-203ENST00000458610 IRX5P78411 483 aaPredicted RBP18.48■□□□□ 0.55
CD28-203ENST00000458610 MRPS9P82933 396 aaKnown RBP18.48■□□□□ 0.55
CD28-203ENST00000458610 TLE2Q04725 743 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 SCRN1Q12765 414 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 WASF1Q92558 559 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 COPS5Q92905 334 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 GPRASP2Q96D09 838 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 MLXIPQ9HAP2 919 aa18.48■□□□□ 0.55
CD28-203ENST00000458610 NLRP5P59047 1200 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 ARHGAP1Q07960 439 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 ITGA7Q13683 1181 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 DGKDQ16760 1214 aa18.47■□□□□ 0.55
CD28-203ENST00000458610 CELF3Q5SZQ8 465 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms