RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 NIPA1Q7RTP0 329 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 CLEC4DQ8WXI8 215 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 FAM20AQ96MK3 541 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 MTMR9Q96QG7 549 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 CSRNP2Q9H175 543 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 CUEDC2Q9H467 287 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 GOLPH3LQ9H4A5 285 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 ACAD9Q9H845 621 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 MAGEF1Q9HAY2 307 aa10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 DDX25Q9UHL0 483 aaKnown RBP10.09□□□□□ -0.79
CDC42EP3-204ENST00000457889 PFASO15067 1338 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 RPTORQ8N122 1335 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 A0A1B0GVL5 298 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 VWA3AA6NCI4 1184 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 WNT7AO00755 349 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 SLC25A27O95847 323 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 ITGBL1O95965 494 aaPredicted RBP10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 CCDC192P0DO97 292 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 ALAS1P13196 640 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 STAT3P40763 770 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 SNRNP48Q6IEG0 339 aaKnown RBP10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 CPXCR1Q8N123 301 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 KCTD17Q8N5Z5 321 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 IGSF22Q8N9C0 903 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 IQUBQ8NA54 791 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 WNK4Q96J92 1243 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 TRERF1Q96PN7 1200 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 SDF4Q9BRK5 362 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 CCSER1Q9C0I3 900 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 ZNF408Q9H9D4 720 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 RAVER2Q9HCJ3 691 aaKnown RBP10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 ZCCHC17Q9NP64 241 aaKnown RBP10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 RNF146Q9NTX7 359 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 TRPM7Q96QT4 1865 aa10.08□□□□□ -0.8
CDC42EP3-204ENST00000457889 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 SYCE3A1L190 88 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 FSD2A1L4K1 749 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 GOLGA6L3A6NEY3 463 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 STAM2O75886 525 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 TDP2O95551 362 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 MYL1P05976 194 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 BCRP11274 1271 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 HOXA13P31271 388 aaPredicted RBP10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 UBA7P41226 1012 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 HERVK_113P62684 666 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 SEMA3FQ13275 785 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 DGKZQ13574 1117 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 MOGSQ13724 837 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 TMEM132BQ14DG7 1078 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 TREML2Q5T2D2 321 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 L1TD1Q5T7N2 865 aaKnown RBP10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 RNF207Q6ZRF8 634 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 MOB2Q70IA6 237 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 ANKRD23Q86SG2 305 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 RIOX2Q8IUF8 465 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 CLIC6Q96NY7 704 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 ASCC2Q9H1I8 757 aaPredicted RBP10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 TMEM60Q9H2L4 133 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 KCNMB3Q9NPA1 279 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 CCDC39Q9UFE4 941 aa10.07□□□□□ -0.8
CDC42EP3-204ENST00000457889 LOC102724159A0A0B4J2E5 919 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 B4DLN1 442 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 NFIBO00712 420 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 MARCH6O60337 910 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 SLFN14P0C7P3 912 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 ZNF76P36508 570 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 GCLCP48506 637 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 RPS6P62753 249 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 PWP2Q15269 919 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 ZRSR1Q15695 479 aaKnown RBP10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 CEP55Q53EZ4 464 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 SPRYD7Q5W111 196 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 PCNX4Q63HM2 1172 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 KRBA2Q6ZNG9 492 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 FCHSD1Q86WN1 690 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 CEP57L1Q8IYX8 460 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 SMC1BQ8NDV3 1235 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 SHCBP1Q8NEM2 672 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 SYTL5Q8TDW5 730 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 HHIPL1Q96JK4 782 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 MFRPQ9BY79 579 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 SPATC1LQ9H0A9 340 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 TSPY26PQ9H489 355 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 KDM3AQ9Y4C1 1321 aa10.06□□□□□ -0.8
CDC42EP3-204ENST00000457889 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 MEIS1O00470 390 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 POLR2DO15514 142 aaKnown RBP10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 MAFGO15525 162 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 SLC37A4O43826 429 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 EDIL3O43854 480 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 GJA5P36382 358 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 MRE11P49959 708 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 CCNA1P78396 465 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 GRIN1Q05586 938 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 IL17AQ16552 155 aa10.05□□□□□ -0.8
CDC42EP3-204ENST00000457889 HAUS3Q68CZ6 603 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms