RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 CTAGE5O15320 804 aa26.64■■□□□ 1.86
CBX3-204ENST00000456948 GH1P01241 217 aa26.64■■□□□ 1.86
CBX3-204ENST00000456948 TGFB3P10600 412 aa26.64■■□□□ 1.86
CBX3-204ENST00000456948 ADD1P35611 737 aaKnown RBP26.64■■□□□ 1.86
CBX3-204ENST00000456948 NAPAP54920 295 aa26.64■■□□□ 1.86
CBX3-204ENST00000456948 PRDM5Q9NQX1 630 aaPredicted RBP26.64■■□□□ 1.86
CBX3-204ENST00000456948 TRIOBPQ9H2D6 2365 aa26.64■■□□□ 1.85
CBX3-204ENST00000456948 TLR3O15455 904 aaKnown RBP26.63■■□□□ 1.85
CBX3-204ENST00000456948 PQBP1O60828 265 aaKnown RBP26.63■■□□□ 1.85
CBX3-204ENST00000456948 CDC27P30260 824 aa26.63■■□□□ 1.85
CBX3-204ENST00000456948 EVCP57679 992 aa26.63■■□□□ 1.85
CBX3-204ENST00000456948 CCDC62Q6P9F0 684 aa26.63■■□□□ 1.85
CBX3-204ENST00000456948 CPLX2Q6PUV4 134 aaKnown RBP26.63■■□□□ 1.85
CBX3-204ENST00000456948 USP17L6PQ6QN14 398 aa26.63■■□□□ 1.85
CBX3-204ENST00000456948 CXCL17Q6UXB2 119 aa26.63■■□□□ 1.85
CBX3-204ENST00000456948 ANKRD33Q7Z3H0 272 aa26.63■■□□□ 1.85
CBX3-204ENST00000456948 CCDC12Q8WUD4 166 aaPredicted RBP26.63■■□□□ 1.85
CBX3-204ENST00000456948 PRO3102Q9H379 93 aa26.63■■□□□ 1.85
CBX3-204ENST00000456948 ARVCFO00192 962 aa26.62■■□□□ 1.85
CBX3-204ENST00000456948 MEIS2O14770 477 aa26.62■■□□□ 1.85
CBX3-204ENST00000456948 CLTBP09497 229 aa26.62■■□□□ 1.85
CBX3-204ENST00000456948 LAMC2Q13753 1193 aa26.62■■□□□ 1.85
CBX3-204ENST00000456948 ZNF274Q96GC6 653 aaPredicted RBP26.62■■□□□ 1.85
CBX3-204ENST00000456948 UPF3BQ9BZI7 483 aaKnown RBP26.62■■□□□ 1.85
CBX3-204ENST00000456948 FAM217BQ9NTX9 383 aaPredicted RBP26.62■■□□□ 1.85
CBX3-204ENST00000456948 DDX41Q9UJV9 622 aaKnown RBP26.62■■□□□ 1.85
CBX3-204ENST00000456948 DNAH12Q6ZR08 3092 aa26.62■■□□□ 1.85
CBX3-204ENST00000456948 A6NJR5 290 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 MYL3P08590 195 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 PDIA3P30101 505 aaKnown RBP26.61■■□□□ 1.85
CBX3-204ENST00000456948 IRX5P78411 483 aaPredicted RBP26.61■■□□□ 1.85
CBX3-204ENST00000456948 FUT2Q10981 343 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 LY6KQ17RY6 165 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 TMEM63BQ5T3F8 832 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 GPKOWQ92917 476 aaPredicted RBP eCLIP26.61■■□□□ 1.858e-6■■□□□ 13.6
CBX3-204ENST00000456948 MTG1Q9BT17 334 aaPredicted RBP26.61■■□□□ 1.85
CBX3-204ENST00000456948 TMEM39AQ9NV64 488 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 PCDH10Q9P2E7 1040 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 KIAA1217Q5T5P2 1943 aa26.61■■□□□ 1.85
CBX3-204ENST00000456948 NID2Q14112 1375 aa26.6■■□□□ 1.85
CBX3-204ENST00000456948 A0A1W2PPC1 479 aa26.6■■□□□ 1.85
CBX3-204ENST00000456948 CPLX1O14810 134 aa26.6■■□□□ 1.85
CBX3-204ENST00000456948 FOSP01100 380 aaPredicted RBP26.6■■□□□ 1.85
CBX3-204ENST00000456948 BMP8BP34820 402 aa26.6■■□□□ 1.85
CBX3-204ENST00000456948 MAGEA10P43363 369 aaPredicted RBP26.6■■□□□ 1.85
CBX3-204ENST00000456948 ANKRD1Q15327 319 aa26.6■■□□□ 1.85
CBX3-204ENST00000456948 WWC2Q6AWC2 1192 aa26.6■■□□□ 1.85
CBX3-204ENST00000456948 DHX37Q8IY37 1157 aaKnown RBP26.6■■□□□ 1.85
CBX3-204ENST00000456948 BARHL2Q9NY43 387 aa26.6■■□□□ 1.85
CBX3-204ENST00000456948 PRPF3O43395 683 aaKnown RBP26.59■■□□□ 1.85
CBX3-204ENST00000456948 ADCY7P51828 1080 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 ITGA7Q13683 1181 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 PFKFB3Q16875 520 aaPredicted RBP26.59■■□□□ 1.85
CBX3-204ENST00000456948 PCNX4Q63HM2 1172 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 NLRX1Q86UT6 975 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 TRIM22Q8IYM9 498 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 GDF15Q99988 308 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 RIC8AQ9NPQ8 531 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 FRMPD4Q14CM0 1322 aa26.59■■□□□ 1.85
CBX3-204ENST00000456948 SMCO2A6NFE2 343 aa26.58■■□□□ 1.85
CBX3-204ENST00000456948 ARIH2O95376 493 aa26.58■■□□□ 1.85
CBX3-204ENST00000456948 SCG2P13521 617 aa26.58■■□□□ 1.85
CBX3-204ENST00000456948 CDK7P50613 346 aa26.58■■□□□ 1.85
CBX3-204ENST00000456948 CCT2P78371 535 aaKnown RBP26.58■■□□□ 1.85
CBX3-204ENST00000456948 TOB2Q14106 344 aaPredicted RBP26.58■■□□□ 1.85
CBX3-204ENST00000456948 COPS5Q92905 334 aa26.58■■□□□ 1.85
CBX3-204ENST00000456948 EMID1Q96A84 441 aaPredicted RBP26.58■■□□□ 1.85
CBX3-204ENST00000456948 RNF26Q9BY78 433 aaPredicted RBP26.58■■□□□ 1.85
CBX3-204ENST00000456948 UBE2OQ9C0C9 1292 aaKnown RBP26.58■■□□□ 1.85
CBX3-204ENST00000456948 RAG1P15918 1043 aa26.57■■□□□ 1.84
CBX3-204ENST00000456948 PURAQ00577 322 aaKnown RBP26.57■■□□□ 1.84
CBX3-204ENST00000456948 DGKDQ16760 1214 aa26.57■■□□□ 1.84
CBX3-204ENST00000456948 MCTP2Q6DN12 878 aa26.57■■□□□ 1.84
CBX3-204ENST00000456948 IL31RAQ8NI17 732 aa26.57■■□□□ 1.84
CBX3-204ENST00000456948 CDHR1Q96JP9 859 aa26.57■■□□□ 1.84
CBX3-204ENST00000456948 MLXIPQ9HAP2 919 aa26.57■■□□□ 1.84
CBX3-204ENST00000456948 PDLIM7Q9NR12 457 aa26.57■■□□□ 1.84
CBX3-204ENST00000456948 STXBP3O00186 592 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 IFNAR1P17181 557 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 PTGS1P23219 599 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 MDM2Q00987 491 aaPredicted RBP26.56■■□□□ 1.84
CBX3-204ENST00000456948 ARHGAP1Q07960 439 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 NEDD9Q14511 834 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 GIMAP8Q8ND71 665 aaPredicted RBP26.56■■□□□ 1.84
CBX3-204ENST00000456948 AFG1LQ8WV93 481 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 ALDH8A1Q9H2A2 487 aaPredicted RBP26.56■■□□□ 1.84
CBX3-204ENST00000456948 C6orf50Q9HD87 102 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 PCDHA6Q9UN73 950 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 PCDHA8Q9Y5H6 950 aa26.56■■□□□ 1.84
CBX3-204ENST00000456948 KIAA0355O15063 1070 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 FIBPO43427 364 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 GNA11P29992 359 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 ICAM3P32942 547 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 UBE2SQ16763 222 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 SLC43A3Q8NBI5 491 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 INPP4AQ96PE3 977 aaPredicted RBP26.55■■□□□ 1.84
CBX3-204ENST00000456948 SLC26A6Q9BXS9 759 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 RTEL1Q9NZ71 1219 aa26.55■■□□□ 1.84
CBX3-204ENST00000456948 RANBP2P49792 3224 aaKnown RBP26.55■■□□□ 1.84
CBX3-204ENST00000456948 CDKL5O76039 1030 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms