RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 DGKHQ86XP1 1220 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 EMID1Q96A84 441 aaPredicted RBP13.95□□□□□ -0.18
LMCD1-206ENST00000456506 UBA5Q9GZZ9 404 aa13.95□□□□□ -0.18
LMCD1-206ENST00000456506 TSPYL2Q9H2G4 693 aaPredicted RBP13.95□□□□□ -0.18
LMCD1-206ENST00000456506 ABCB11O95342 1321 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 HAS3O00219 553 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 HOXD8P13378 290 aaPredicted RBP13.94□□□□□ -0.18
LMCD1-206ENST00000456506 RRP1P56182 461 aaKnown RBP13.94□□□□□ -0.18
LMCD1-206ENST00000456506 DEFB103AP81534 67 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 HIC1Q14526 733 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 RETREG2Q8NC44 543 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 PNMA1Q8ND90 353 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 ARNTL2Q8WYA1 636 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 WNT8BQ93098 351 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 CRBNQ96SW2 442 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
LMCD1-206ENST00000456506 GTF2IRD1Q9UHL9 959 aa13.94□□□□□ -0.18
LMCD1-206ENST00000456506 DDX41Q9UJV9 622 aaKnown RBP13.94□□□□□ -0.18
LMCD1-206ENST00000456506 RGS20O76081 388 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 F2P00734 622 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 GH1P01241 217 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 CKBP12277 381 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 SELPP16109 830 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 MBTPS1Q14703 1052 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 AAK1Q2M2I8 961 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 LRRC8DQ7L1W4 858 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 ENAHQ8N8S7 591 aaPredicted RBP13.93□□□□□ -0.18
LMCD1-206ENST00000456506 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.18
LMCD1-206ENST00000456506 IWS1Q96ST2 819 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 FTOQ9C0B1 505 aaKnown RBP eCLIP13.93□□□□□ -0.18
LMCD1-206ENST00000456506 JMJD4Q9H9V9 463 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 COG5Q9UP83 839 aa13.93□□□□□ -0.18
LMCD1-206ENST00000456506 GTPBP6O43824 516 aaPredicted RBP13.92□□□□□ -0.18
LMCD1-206ENST00000456506 SDSP20132 328 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 PLA2G5P39877 138 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 QRICH1Q2TAL8 776 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 CNKSR3Q6P9H4 555 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 SEPT14Q6ZU15 432 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 NSUN6Q8TEA1 469 aaKnown RBP13.92□□□□□ -0.18
LMCD1-206ENST00000456506 ESR2Q92731 530 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 RMDN3Q96TC7 470 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 RNF41Q9H4P4 317 aaPredicted RBP13.92□□□□□ -0.18
LMCD1-206ENST00000456506 EPHX3Q9H6B9 360 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 HDAC6Q9UBN7 1215 aa13.92□□□□□ -0.18
LMCD1-206ENST00000456506 B4DLN1 442 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
LMCD1-206ENST00000456506 KDM4AO75164 1064 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 GJB5O95377 273 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 CASTP20810 708 aaKnown RBP13.91□□□□□ -0.18
LMCD1-206ENST00000456506 PSEN2P49810 448 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 NT5C2P49902 561 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 HSD17B4P51659 736 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
LMCD1-206ENST00000456506 STXBP2Q15833 593 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 ASPRV1Q53RT3 343 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 SMC5Q8IY18 1101 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 CCDC155Q8N6L0 562 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 IL27Q8NEV9 243 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 MTMR8Q96EF0 704 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 LNPKQ9C0E8 428 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 OSBPL3Q9H4L5 887 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 SUGCTQ9HAC7 445 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 C11orf16Q9NQ32 467 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 PXMP2Q9NR77 195 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 LMCD1Q9NZU5 365 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 ZSWIM5Q9P217 1185 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 NOD1Q9Y239 953 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 C5orf42Q9H799 3197 aa13.91□□□□□ -0.18
LMCD1-206ENST00000456506 B4E1Z4 1266 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 KIF28PB7ZC32 967 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 ZNF213O14771 459 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
LMCD1-206ENST00000456506 PARNO95453 639 aaKnown RBP13.9□□□□□ -0.18
LMCD1-206ENST00000456506 ZNF286BP0CG31 522 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 HOXC8P31273 242 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 ERVK-21P61565 698 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 SKIV2LQ15477 1246 aaKnown RBP13.9□□□□□ -0.18
LMCD1-206ENST00000456506 DGKDQ16760 1214 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 SLC35G1Q2M3R5 365 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 CHST3Q7LGC8 479 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 PPTC7Q8NI37 304 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 GDPD5Q8WTR4 605 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 ZSCAN10Q96SZ4 725 aaPredicted RBP13.9□□□□□ -0.18
LMCD1-206ENST00000456506 C1QTNF1Q9BXJ1 281 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 CD320Q9NPF0 282 aa13.9□□□□□ -0.18
LMCD1-206ENST00000456506 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
LMCD1-206ENST00000456506 ABHD14A-ACY1A0A1B0GW23 586 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 LINC01553A4QN01 128 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 NR3C2P08235 984 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 EIF2AK2P19525 551 aaKnown RBP13.89□□□□□ -0.19
LMCD1-206ENST00000456506 KCNJ6P48051 423 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 CHMP4BP1P59074 171 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 ZNF200P98182 395 aaPredicted RBP13.89□□□□□ -0.19
LMCD1-206ENST00000456506 PTK7Q13308 1070 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 MFSD10Q14728 455 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 SEC23AQ15436 765 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 KIAA0753Q2KHM9 967 aa13.89□□□□□ -0.19
LMCD1-206ENST00000456506 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms