RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 KRT38O76015 456 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SYF2O95926 243 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 GJC1P36383 396 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 MRPS25P82663 173 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 MDM2Q00987 491 aaPredicted RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 E2F5Q15329 346 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZNF658Q5TYW1 1059 aaPredicted RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 RRAGAQ7L523 313 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 FAM178BQ8IXR5 827 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 NEK9Q8TD19 979 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CMTM5Q96DZ9 223 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 NDUFA13Q9P0J0 144 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CHL1O00533 1208 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 MBD4O95243 580 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 MYBL1P10243 752 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 GPTP24298 496 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 COPB2P35606 906 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 GCKRQ14397 625 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CAPRIN1Q14444 709 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TRAPPC3LQ5T215 181 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TRIM72Q6ZMU5 477 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 C16orf71Q8IYS4 520 aaPredicted RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 FBXL13Q8NEE6 735 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SH3TC2Q8TF17 1288 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 PHKBQ93100 1093 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 THOC1Q96FV9 657 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TIPINQ9BVW5 301 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 VIPAS39Q9H9C1 493 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 LMBRD1Q9NUN5 540 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 WDR62O43379 1518 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TARSL2A2RTX5 802 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SMIM23A6NLE4 172 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 H7C0S8 307 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ASAP2O43150 1006 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 PSMD3O43242 534 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 MCF2P10911 925 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZFXP17010 805 aaPredicted RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TNNI1P19237 187 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 AP2B1P63010 937 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CCNA1P78396 465 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZBED6P86452 979 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 RAD51AP2Q09MP3 1159 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 EIF4A2Q14240 407 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 EXOC3L4Q17RC7 722 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 KRT40Q6A162 431 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ARHGAP27Q6ZUM4 889 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CRLF3Q8IUI8 442 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ALKBH8Q96BT7 664 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SPDL1Q96EA4 605 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 FAM212AQ96EL1 285 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 MAML3Q96JK9 1138 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 NT5C1BQ96P26 610 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZBTB18Q99592 522 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SNX25Q9H3E2 840 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TMX1Q9H3N1 280 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 DIABLOQ9NR28 239 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 PANK4Q9NVE7 773 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 NCAPD2Q15021 1401 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 NEURL4Q96JN8 1562 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 DYTNA2CJ06 578 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 APOA1P02647 267 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 MX2P20592 715 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CCT5P48643 541 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 PAPOLAP51003 745 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 NEK2P51955 445 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 STX17P56962 302 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CDC42EP1Q00587 391 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 RIPPLY1Q0D2K3 151 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TFCP2Q12800 502 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 IQCB1Q15051 598 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZNF790Q6PG37 636 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CNBD1Q8NA66 436 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TNIP2Q8NFZ5 429 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 KLHL29Q96CT2 875 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZSCAN10Q96SZ4 725 aaPredicted RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 FMO2Q99518 471 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 USP40Q9NVE5 1235 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SUN2Q9UH99 717 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 FRMD3A2A2Y4 597 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 POLR2MP0CAP2 368 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 PPP2R5CQ13362 524 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZNF174Q15697 407 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 PRUNE1Q86TP1 453 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 POLKQ9UBT6 870 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 BLOC1S6Q9UL45 172 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 TLR3O15455 904 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CDH2P19022 906 aaPredicted RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ECE1P42892 770 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 LAMC2Q13753 1193 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SPARCL1Q14515 664 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 CC2D2BQ6DHV5 1058 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 PDIK1LQ8N165 341 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SEPT8Q92599 483 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 FRMD8Q9BZ67 464 aaPredicted RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 KDM4CQ9H3R0 1056 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 BICC1Q9H694 974 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 SEPT3Q9UH03 358 aa4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 AFPP02771 609 aaKnown RBP4.35□□□□□ -1.71
PPP1R9A-208ENST00000456331 ARL4AP40617 200 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms