RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 TUBBP07437 444 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 CCDC96Q2M329 555 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 STYK1Q6J9G0 422 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 CLEC10AQ8IUN9 316 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 EEF2KMTQ96G04 330 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 EIF3CQ99613 913 aaKnown RBP22.35■■□□□ 1.17
CSPG5-203ENST00000456150 ZHX1Q9UKY1 873 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-203ENST00000456150 MYH7BA7E2Y1 1941 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 ZBTB5O15062 677 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 SASH3O75995 380 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 LONRF2Q1L5Z9 754 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 FOXR2Q6PJQ5 311 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 SLC16A10Q8TF71 515 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 HPS3Q969F9 1004 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 TEKT1Q969V4 418 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 UBXN6Q9BZV1 441 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 GLT8D2Q9H1C3 349 aa22.35■■□□□ 1.17
CSPG5-203ENST00000456150 NHEJ1Q9H9Q4 299 aaPredicted RBP22.35■■□□□ 1.17
CSPG5-203ENST00000456150 DDX25Q9UHL0 483 aaKnown RBP22.35■■□□□ 1.17
CSPG5-203ENST00000456150 SLX4Q8IY92 1834 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 SEPT2Q15019 361 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 UBE2SQ16763 222 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 VWA3BQ502W6 1294 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 CDC42EP5Q6NZY7 148 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 DYMQ7RTS9 669 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 JAKMIP2Q96AA8 810 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 PKNOX2Q96KN3 472 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 CCDC17Q96LX7 622 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 FUT8Q9BYC5 575 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 TRIM10Q9UDY6 481 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 PPP1R11O60927 126 aaPredicted RBP22.34■■□□□ 1.17
CSPG5-203ENST00000456150 KLK7P49862 253 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 MAN2A1Q16706 1144 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 TRAPPC11Q7Z392 1133 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 MTMR8Q96EF0 704 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 TSG101Q99816 390 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 EHD4Q9H223 541 aa22.34■■□□□ 1.17
CSPG5-203ENST00000456150 MPHOSPH10O00566 681 aaKnown RBP22.33■■□□□ 1.17
CSPG5-203ENST00000456150 MARCH6O60337 910 aa22.33■■□□□ 1.17
CSPG5-203ENST00000456150 UPF1Q92900 1129 aaKnown RBP eCLIP22.33■■□□□ 1.17
CSPG5-203ENST00000456150 ADAMTSL1Q8N6G6 1762 aa22.33■■□□□ 1.17
CSPG5-203ENST00000456150 KDM3AQ9Y4C1 1321 aa22.33■■□□□ 1.16
CSPG5-203ENST00000456150 G3V3G9 751 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 IDEP14735 1019 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 SCNN1DP51172 638 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 DCAF8Q5TAQ9 597 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 TTBK2Q6IQ55 1244 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 CCDC84Q86UT8 332 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-203ENST00000456150 DDX12PQ92771 950 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 GBP3Q9H0R5 595 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 NDST4Q9H3R1 872 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 PSTPIP2Q9H939 334 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 ATF5Q9Y2D1 282 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-203ENST00000456150 ATP2B2Q01814 1243 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 EHHADHQ08426 723 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 TSGA10Q9BZW7 698 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 NT5C3AQ9H0P0 336 aa22.32■■□□□ 1.16
CSPG5-203ENST00000456150 TMX4Q9H1E5 349 aaPredicted RBP22.32■■□□□ 1.16
CSPG5-203ENST00000456150 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
CSPG5-203ENST00000456150 HNRNPH3P31942 346 aaKnown RBP22.31■■□□□ 1.16
CSPG5-203ENST00000456150 SMC1AQ14683 1233 aaKnown RBP22.31■■□□□ 1.16
CSPG5-203ENST00000456150 R3HDM1Q15032 1099 aaKnown RBP22.31■■□□□ 1.16
CSPG5-203ENST00000456150 USP17L10C9JJH3 530 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 SLC26A4O43511 780 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 SLC16A2P36021 539 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 DOK7Q18PE1 504 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 PAPD7Q5XG87 772 aaKnown RBP22.3■■□□□ 1.16
CSPG5-203ENST00000456150 APOBEC3HQ6NTF7 200 aaKnown RBP22.3■■□□□ 1.16
CSPG5-203ENST00000456150 HAS1Q92839 578 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 NUDT12Q9BQG2 462 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 PCDHA12Q9UN75 941 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 SIK3Q9Y2K2 1263 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 SAR1BQ9Y6B6 198 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 SPA17Q15506 151 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 HYIQ5T013 277 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 KCTD1Q719H9 257 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 CCDC42Q96M95 316 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 PNKPQ96T60 521 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 MXD3Q9BW11 206 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 BMP2KQ9NSY1 1161 aaPredicted RBP22.3■■□□□ 1.16
CSPG5-203ENST00000456150 PLAGL2Q9UPG8 496 aa22.3■■□□□ 1.16
CSPG5-203ENST00000456150 ANO9A1A5B4 782 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 MAP2K7O14733 419 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 VAV2P52735 878 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 BEND6Q5SZJ8 279 aaPredicted RBP22.29■■□□□ 1.16
CSPG5-203ENST00000456150 KCNK18Q7Z418 384 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 CNKSR1Q969H4 720 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 RHOXF2BP0C7M4 288 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 OAS2P29728 719 aaKnown RBP22.29■■□□□ 1.16
CSPG5-203ENST00000456150 CKAP4Q07065 602 aaKnown RBP22.29■■□□□ 1.16
CSPG5-203ENST00000456150 KIF5AQ12840 1032 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 NCAPH2Q6IBW4 605 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 HDXQ7Z353 690 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 MYOCDQ8IZQ8 938 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 DCAF4Q8WV16 495 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 RPGRIP1Q96KN7 1286 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 RHOXF2Q9BQY4 288 aa22.29■■□□□ 1.16
CSPG5-203ENST00000456150 DHX36Q9H2U1 1008 aaKnown RBP22.29■■□□□ 1.16
CSPG5-203ENST00000456150 TFRCP02786 760 aaKnown RBP22.28■■□□□ 1.16
CSPG5-203ENST00000456150 CRKP46108 304 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms