RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 HOXC12P31275 282 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 VWA3BQ502W6 1294 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 MRM1Q6IN84 353 aaKnown RBP5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 CCDC140Q96MF4 163 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 LGR4Q9BXB1 951 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 RNF38Q9H0F5 515 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 GPRC5CQ9NQ84 441 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 ST7Q9NRC1 585 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 RWDD3Q9Y3V2 267 aa5.8□□□□□ -1.48
R3HDM1-212ENST00000456040 C7orf72A4D263 438 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 F8W031 263 aaPredicted RBP5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 KLF4O43474 513 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 NOBOXO60393 691 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 NCAM1P13591 858 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 TACR2P21452 398 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 DDR2Q16832 855 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 IQCEQ6IPM2 695 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 CARFQ8N187 725 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 USP33Q8TEY7 942 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 BTN2A2Q8WVV5 523 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 C8orf49Q96NF6 230 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 C1QTNF3Q9BXJ4 246 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 LNPKQ9C0E8 428 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 GULP1Q9UBP9 304 aa5.79□□□□□ -1.48
R3HDM1-212ENST00000456040 STK10O94804 968 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 CPP00450 1065 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 SNRPB2P08579 225 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 GLI4P10075 376 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 ZNF20P17024 532 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 E4F1Q66K89 784 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 TTLL7Q6ZT98 887 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 CELF2-AS1Q8N7Q2 184 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 ZNF526Q8TF50 670 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 FRS2Q8WU20 508 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 DVL3Q92997 716 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 KISS1RQ969F8 398 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 MTA3Q9BTC8 594 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 NUDT5Q9UKK9 219 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 DUSP10Q9Y6W6 482 aa5.78□□□□□ -1.48
R3HDM1-212ENST00000456040 TBX1O43435 398 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 PPP1R11O60927 126 aaPredicted RBP5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 SCG5P05408 212 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 ECI1P42126 302 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 KCNJ6P48051 423 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 SARSP49591 514 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 PRR5P85299 388 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 RAB33AQ14088 237 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 SLC10A6Q3KNW5 377 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 CKAP2LQ8IYA6 745 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 NPLOC4Q8TAT6 608 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 TRIM55Q9BYV6 548 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 NTMQ9P121 344 aa5.77□□□□□ -1.49
R3HDM1-212ENST00000456040 MEFVO15553 781 aaPredicted RBP5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 FZD7O75084 574 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 PLA2G1BP04054 148 aaKnown RBP5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 FUCA1P04066 466 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 ATP2B1P20020 1258 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 CYP4F3Q08477 520 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 KCNAB2Q13303 367 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 WWC2Q6AWC2 1192 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 FAM124AQ86V42 546 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 PEX11GQ96HA9 241 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 C8orf37Q96NL8 207 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 RBM15Q96T37 977 aaKnown RBP eCLIP5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 TANGO6Q9C0B7 1094 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 MARCH2Q9P0N8 246 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 PPP1R1BQ9UD71 204 aaPredicted RBP5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 HCFC2Q9Y5Z7 792 aa5.76□□□□□ -1.49
R3HDM1-212ENST00000456040 IQCA1LA6NCM1 817 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 U2SURPO15042 1029 aaKnown RBP5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 MYO1BO43795 1136 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 ZBTB7AO95365 584 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 PLATP00750 562 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 GTF2A2P52657 109 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 GFRA1P56159 465 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 HTRA3P83110 453 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 KIAA2012Q0VF49 1180 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 SLC9A5Q14940 896 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 INF2Q27J81 1249 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 ACBD5Q5T8D3 534 aaPredicted RBP5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 MBLAC2Q68D91 279 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 GLB1LQ6UWU2 654 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 SH3RF3Q8TEJ3 882 aaPredicted RBP5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 DIO2Q92813 273 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 TSPAN17Q96FV3 270 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 SGSM3Q96HU1 749 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 SCAND2PQ9GZW5 306 aaPredicted RBP5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 BTG4Q9NY30 223 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 FBLN5Q9UBX5 448 aa5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 TIMM13Q9Y5L4 95 aaPredicted RBP5.75□□□□□ -1.49
R3HDM1-212ENST00000456040 ZNF536O15090 1300 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 ATF2P15336 505 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 RPL11P62913 178 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 PPP2R2AP63151 447 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 SF1Q15637 639 aaKnown RBP5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 ZFPM1Q8IX07 1006 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 PPIL6Q8IXY8 311 aa5.74□□□□□ -1.49
R3HDM1-212ENST00000456040 KREMEN2Q8NCW0 462 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms