RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 PRDM5Q9NQX1 630 aaPredicted RBP13.69□□□□□ -0.22
TMEM56-202ENST00000455656 DDX41Q9UJV9 622 aaKnown RBP13.69□□□□□ -0.22
TMEM56-202ENST00000455656 LAMA3Q16787 3333 aa13.69□□□□□ -0.22
TMEM56-202ENST00000455656 CABYRO75952 493 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 PSMC6P62333 389 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 MRPS9P82933 396 aaKnown RBP13.68□□□□□ -0.22
TMEM56-202ENST00000455656 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 RTN1Q16799 776 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 USP17L6PQ6QN14 398 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 BLOC1S2Q6QNY1 142 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 FCHSD1Q86WN1 690 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 GPKOWQ92917 476 aaPredicted RBP eCLIP13.68□□□□□ -0.22
TMEM56-202ENST00000455656 BADQ92934 168 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 BRF1Q92994 677 aa13.68□□□□□ -0.22
TMEM56-202ENST00000455656 ZFP91Q96JP5 570 aaPredicted RBP13.68□□□□□ -0.22
TMEM56-202ENST00000455656 RBM28Q9NW13 759 aaKnown RBP13.68□□□□□ -0.22
TMEM56-202ENST00000455656 MROH7Q68CQ1 1323 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 GOLGA8AA7E2F4 631 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 GOLGA8BA8MQT2 603 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 MYCLP12524 364 aaPredicted RBP13.67□□□□□ -0.22
TMEM56-202ENST00000455656 CASTP20810 708 aaKnown RBP13.67□□□□□ -0.22
TMEM56-202ENST00000455656 ADD1P35611 737 aaKnown RBP13.67□□□□□ -0.22
TMEM56-202ENST00000455656 CPT1AP50416 773 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 EPHB4P54760 987 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 EVCP57679 992 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 SEMA3FQ13275 785 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 ITGA7Q13683 1181 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 TOB2Q14106 344 aaPredicted RBP13.67□□□□□ -0.22
TMEM56-202ENST00000455656 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 TDHQ8IZJ6 230 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 EMID1Q96A84 441 aaPredicted RBP13.67□□□□□ -0.22
TMEM56-202ENST00000455656 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
TMEM56-202ENST00000455656 ZSWIM6Q9HCJ5 1215 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 POLR3EQ9NVU0 708 aa13.67□□□□□ -0.22
TMEM56-202ENST00000455656 SEC63Q9UGP8 760 aaKnown RBP13.67□□□□□ -0.22
TMEM56-202ENST00000455656 TANC1Q9C0D5 1861 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 DCDC2CA8MYV0 355 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 ZEB2O60315 1214 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 GH1P01241 217 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 MMP3P08254 477 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 SP2Q02086 613 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 LRIT3Q3SXY7 679 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 SYNE3Q6ZMZ3 975 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 AFG1LQ8WV93 481 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
TMEM56-202ENST00000455656 TM6SF1Q9BZW5 370 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 BCAS3Q9H6U6 928 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 TMEM39AQ9NV64 488 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 PRKAG2Q9UGJ0 569 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 SCN5AQ14524 2016 aa13.66□□□□□ -0.22
TMEM56-202ENST00000455656 B4GALT4O60513 344 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 MYL3P08590 195 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 HOXD8P13378 290 aaPredicted RBP13.65□□□□□ -0.22
TMEM56-202ENST00000455656 CCND2P30279 289 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 ICAM3P32942 547 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 NTRK3Q16288 839 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 UBE2SQ16763 222 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 C9orf50Q5SZB4 431 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 RUFY3Q7L099 469 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 PPP1R13LQ8WUF5 828 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 KAT2BQ92831 832 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 VTI1AQ96AJ9 217 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 LRCH3Q96II8 777 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
TMEM56-202ENST00000455656 MTG1Q9BT17 334 aaPredicted RBP13.65□□□□□ -0.22
TMEM56-202ENST00000455656 MRVI1Q9Y6F6 885 aa13.65□□□□□ -0.22
TMEM56-202ENST00000455656 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 TRIP12Q14669 1992 aaPredicted RBP13.64□□□□□ -0.23
TMEM56-202ENST00000455656 STXBP3O00186 592 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 TIMP1P01033 207 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 UBA1P22314 1058 aaKnown RBP13.64□□□□□ -0.23
TMEM56-202ENST00000455656 PSMA5P28066 241 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 METAP2P50579 478 aaKnown RBP eCLIP13.64□□□□□ -0.23
TMEM56-202ENST00000455656 PKN1Q16512 942 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 MYSM1Q5VVJ2 828 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 PCNX4Q63HM2 1172 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 SMARCC2Q8TAQ2 1214 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 SEZ6LQ9BYH1 1024 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 TRPV6Q9H1D0 765 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 ALDH8A1Q9H2A2 487 aaPredicted RBP13.64□□□□□ -0.23
TMEM56-202ENST00000455656 PSTPIP2Q9H939 334 aa13.64□□□□□ -0.23
TMEM56-202ENST00000455656 V9GY48 417 aaPredicted RBP13.64□□□□□ -0.23
TMEM56-202ENST00000455656 SPATA31C2B4DYI2 1134 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 ADAMTS3O15072 1205 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 KPNA6O60684 536 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 TGFB3P10600 412 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 RAG1P15918 1043 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 PDIA3P30101 505 aaKnown RBP13.63□□□□□ -0.23
TMEM56-202ENST00000455656 CLK2P49760 499 aaKnown RBP13.63□□□□□ -0.23
TMEM56-202ENST00000455656 SHHQ15465 462 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 NBPF20Q3BBV1 942 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 HSDL1Q3SXM5 330 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 CELF3Q5SZQ8 465 aaKnown RBP13.63□□□□□ -0.23
TMEM56-202ENST00000455656 PPP1R18Q6NYC8 613 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 HEATR3Q7Z4Q2 680 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 PPTC7Q8NI37 304 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 VWCEQ96DN2 955 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 CTAGE1Q96RT6 745 aa13.63□□□□□ -0.23
TMEM56-202ENST00000455656 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms