RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 ESYT1Q9BSJ8 1104 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 MROH8Q9H579 483 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 EPB41L4AQ9HCS5 686 aaPredicted RBP5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 ATP11BQ9Y2G3 1177 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 RIPK3Q9Y572 518 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 RANBP2P49792 3224 aaKnown RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 GREB1LQ9C091 1923 aaPredicted RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 DNM1LO00429 736 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 CAPN5O15484 640 aaPredicted RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SEPT4O43236 478 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 PGK1P00558 417 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 IGFBP4P22692 258 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 TDO2P48775 406 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SMTNP53814 917 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 MFAP1P55081 439 aaKnown RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 RTP1P59025 263 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SNAP25P60880 206 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 CLN3Q13286 438 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 LRRC41Q15345 812 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 ZNF792Q3KQV3 632 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SBK1Q52WX2 424 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 C6orf118Q5T5N4 469 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SH3PXD2AQ5TCZ1 1133 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 CCDC129Q6ZRS4 1044 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 RIOX2Q8IUF8 465 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 TDHQ8IZJ6 230 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 LRRC47Q8N1G4 583 aaKnown RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 MEIOBQ8N635 442 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 DEFB123Q8N688 67 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 ARRDC4Q8NCT1 418 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SLC17A8Q8NDX2 589 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 REPS2Q8NFH8 660 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 KIFC2Q96AC6 838 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 LENG1Q96BZ8 264 aaPredicted RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 CEP95Q96GE4 821 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 FAM161BQ96MY7 647 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 INSM2Q96T92 566 aaPredicted RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SLF1Q9BQI6 1058 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SH2D4AQ9H788 454 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 RAVER2Q9HCJ3 691 aaKnown RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SLC5A4Q9NY91 659 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 SCHIP1Q9P0W5 487 aaPredicted RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 ARPP21Q9UBL0 812 aaPredicted RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 PPP1R9AQ9ULJ8 1098 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 GNEQ9Y223 722 aaKnown RBP5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 TACC3Q9Y6A5 838 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 A0A0G2JMZ2 1700 aa5.59□□□□□ -1.51
GTF3C3-208ENST00000455546 LAMA3Q16787 3333 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 IGKV6D-41A0A0C4DH26 115 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 A0A1W2PPC1 479 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 KBTBD13C9JR72 458 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 H3BRB1 525 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 NMT2O60551 498 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 MSCO60682 206 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 SLC25A27O95847 323 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 SNAI1O95863 264 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 NDUFB10O96000 172 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 ZNF865P0CJ78 1059 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 BMP1P13497 986 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 ITGB8P26012 769 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 FOXK2Q01167 660 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 TFAP4Q01664 338 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 CENPCQ03188 943 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 KCTD2Q14681 263 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 SHHQ15465 462 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 TRIM60Q495X7 471 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 ANKRD45Q5TZF3 282 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 SNRNP48Q6IEG0 339 aaKnown RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 SND1Q7KZF4 910 aaKnown RBP eCLIP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 TAS1R3Q7RTX0 852 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 ABRAQ8N0Z2 381 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 LINC00528Q8N1L1 170 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 PI4K2BQ8TCG2 481 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 BADQ92934 168 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 VTI1AQ96AJ9 217 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 DDX11Q96FC9 970 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 GPATCH3Q96I76 525 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 CRBNQ96SW2 442 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 LBHD1Q9BQE6 289 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 TINF2Q9BSI4 451 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 FSD1Q9BTV5 496 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 TUT1Q9H6E5 874 aaKnown RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 POLMQ9NP87 494 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 PRDM5Q9NQX1 630 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 MTMR4Q9NYA4 1195 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 NYAP2Q9P242 653 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 ZNF214Q9UL59 606 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 ISY1Q9ULR0 285 aaKnown RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 MTMR7Q9Y216 660 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 HRH3Q9Y5N1 445 aa5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 DNMT3AQ9Y6K1 912 aaPredicted RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 DDX49Q9Y6V7 483 aaKnown RBP5.58□□□□□ -1.52
GTF3C3-208ENST00000455546 TRIM43BA6NCK2 446 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 MYADML2A6NDP7 307 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 SOWAHDA6NJG2 315 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 TMEM232C9JQI7 657 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 DLL1O00548 723 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 ERC2O15083 957 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 ZBED4O75132 1171 aa5.57□□□□□ -1.52
GTF3C3-208ENST00000455546 ZFYP08048 801 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms