RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TNKS2Q9H2K2 1166 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 RC3H2Q9HBD1 1191 aaKnown RBP4.88□□□□□ -1.63
RBM39-220ENST00000455343 ADAMTS6Q9UKP5 1117 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 SAMM50Q9Y512 469 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 RTL9Q8NET4 1388 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 TMEM265A0A087WTH1 108 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 BIN1O00499 593 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 FBXO24O75426 580 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 RNASE1P07998 156 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 ITIH2P19823 946 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 RING1Q06587 406 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 CC2D1BQ5T0F9 858 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 INTS3Q68E01 1043 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 LLGL2Q6P1M3 1020 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 KIF6Q6ZMV9 814 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 FAM214BQ7L5A3 538 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 UBE3DQ7Z6J8 389 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 RTF1Q92541 710 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 HEXIM2Q96MH2 286 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 UTP14AQ9BVJ6 771 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 R3HDMLQ9H3Y0 253 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 DBNDD1Q9H9R9 158 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 KCNQ5Q9NR82 932 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 MBNL3Q9NUK0 354 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 MIS18AQ9NYP9 233 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 GGA3Q9NZ52 723 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 POLLQ9UGP5 575 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 HDAC9Q9UKV0 1011 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 RRP7AQ9Y3A4 280 aaKnown RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 CSADQ9Y600 493 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 ASTN2O75129 1339 aaPredicted RBP4.87□□□□□ -1.63
RBM39-220ENST00000455343 TRPM7Q96QT4 1865 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 ZNF609O15014 1411 aa4.87□□□□□ -1.63
RBM39-220ENST00000455343 COL6A3P12111 3177 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 SIPA1L3O60292 1781 aaPredicted RBP4.86□□□□□ -1.63
RBM39-220ENST00000455343 DCDC2CA8MYV0 355 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 GIPC1O14908 333 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 FKTNO75072 461 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 C8AP07357 584 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 MYL6BP14649 208 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 JAG1P78504 1218 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 SF3B3Q15393 1217 aaKnown RBP4.86□□□□□ -1.63
RBM39-220ENST00000455343 ZBTB37Q5TC79 503 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 RASIP1Q5U651 963 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 ANGEL2Q5VTE6 544 aaKnown RBP4.86□□□□□ -1.63
RBM39-220ENST00000455343 ALG1LQ6GMV1 187 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 MOB2Q70IA6 237 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 DDX46Q7L014 1031 aaKnown RBP4.86□□□□□ -1.63
RBM39-220ENST00000455343 ATG4DQ86TL0 474 aaPredicted RBP4.86□□□□□ -1.63
RBM39-220ENST00000455343 NLRP10Q86W26 655 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 ZSCAN29Q8IWY8 852 aaPredicted RBP4.86□□□□□ -1.63
RBM39-220ENST00000455343 LRRN4CLQ8ND94 238 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 PNISRQ8TF01 805 aaKnown RBP4.86□□□□□ -1.63
RBM39-220ENST00000455343 ASB16Q96NS5 453 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 GMLQ99445 158 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 PITPNM2Q9BZ72 1349 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 LAMA3Q16787 3333 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 DUOX1Q9NRD9 1551 aa4.86□□□□□ -1.63
RBM39-220ENST00000455343 UBE2Q2LH0YL09 131 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 IGF2BP3O00425 579 aaKnown RBP eCLIP4.85□□□□□ -1.63
RBM39-220ENST00000455343 FANCGO15287 622 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 ECE2O60344 883 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 CELA3AP09093 270 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 FZD5Q13467 585 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 TCIRG1Q13488 830 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 LRRC14Q15048 493 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 HSP90AB3PQ58FF7 597 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 LDLRAD1Q5T700 205 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 SCARA3Q6AZY7 606 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 OTOP1Q7RTM1 612 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 C12orf40Q86WS4 652 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 SPACA3Q8IXA5 215 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 AGBL3Q8NEM8 1001 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 TBC1D16Q8TBP0 767 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 PI4K2BQ8TCG2 481 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 CELF1Q92879 486 aaKnown RBP4.85□□□□□ -1.63
RBM39-220ENST00000455343 ARMC5Q96C12 935 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 C12orf49Q9H741 205 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 PICK1Q9NRD5 415 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 PODXL2Q9NZ53 605 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 GTF2IRD1Q9UHL9 959 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 PCDHA4Q9UN74 947 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 SNX11Q9Y5W9 270 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 IVNS1ABPQ9Y6Y0 642 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 SH3TC1Q8TE82 1336 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 CLSPNQ9HAW4 1339 aa4.85□□□□□ -1.63
RBM39-220ENST00000455343 U2AF1L5P0DN76 240 aaPredicted RBP4.84□□□□□ -1.63
RBM39-220ENST00000455343 EN2P19622 333 aaPredicted RBP4.84□□□□□ -1.63
RBM39-220ENST00000455343 INHBEP58166 350 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 GPSM2P81274 684 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 U2AF1Q01081 240 aaKnown RBP eCLIP4.84□□□□□ -1.632e-21■□□□□ 10.6
RBM39-220ENST00000455343 ATP2B2Q01814 1243 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 SREBF2Q12772 1141 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 PROSER3Q2NL68 480 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 PCNX4Q63HM2 1172 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 FAM168AQ92567 244 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 EYA3Q99504 573 aa4.84□□□□□ -1.63
RBM39-220ENST00000455343 THUMPD2Q9BTF0 503 aaKnown RBP4.84□□□□□ -1.63
RBM39-220ENST00000455343 TRMT112Q9UI30 125 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms