RNA–Protein interactions for RNA: ENST00000455302.5

LSMEM1-203, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 2

Gene LSMEM1, Length 819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-203ENST00000455302 ARHGEF6Q15052 776 aa8.54□□□□□ -1.04
LSMEM1-203ENST00000455302 PODNQ7Z5L7 613 aa8.54□□□□□ -1.04
LSMEM1-203ENST00000455302 APOBEC3FQ8IUX4 373 aaKnown RBP8.54□□□□□ -1.04
LSMEM1-203ENST00000455302 C19orf47Q8N9M1 422 aaKnown RBP8.54□□□□□ -1.04
LSMEM1-203ENST00000455302 GALNT6Q8NCL4 622 aa8.54□□□□□ -1.04
LSMEM1-203ENST00000455302 DPF3Q92784 378 aa8.54□□□□□ -1.04
LSMEM1-203ENST00000455302 FZD1Q9UP38 647 aa8.54□□□□□ -1.04
LSMEM1-203ENST00000455302 TXNDC11Q6PKC3 985 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 CHSY3Q70JA7 882 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 ELMO3Q96BJ8 720 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 WNK4Q96J92 1243 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 MXD3Q9BW11 206 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 POLR3KQ9Y2Y1 108 aaPredicted RBP8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 SLC12A7Q9Y666 1083 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 PTCH2Q9Y6C5 1203 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 DDX60Q8IY21 1712 aaKnown RBP8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 ANKRD36CQ5JPF3 1778 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 XDHP47989 1333 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 MYO3BQ8WXR4 1341 aa8.53□□□□□ -1.04
LSMEM1-203ENST00000455302 GFRA2O00451 464 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 HSD3B2P26439 372 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 PPP2R1AP30153 589 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 IFRD2Q12894 506 aaPredicted RBP8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 PPP2R5EQ16537 467 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 RNFT1Q5M7Z0 435 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 WIPI1Q5MNZ9 446 aaPredicted RBP8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 HGSNATQ68CP4 663 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 LSRQ86X29 649 aaPredicted RBP8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 FAM169BQ8N8A8 192 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 IRF7Q92985 503 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 ACDQ96AP0 544 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 CLMNQ96JQ2 1002 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 BTBD6Q96KE9 485 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 NRSN2Q9GZP1 204 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 CCDC86Q9H6F5 360 aaKnown RBP8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 SNTG2Q9NY99 539 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 RANBP2P49792 3224 aaKnown RBP8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 LAMB2P55268 1798 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 KDM3BQ7LBC6 1761 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 CLSPNQ9HAW4 1339 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 MAPK8IP3Q9UPT6 1336 aa8.52□□□□□ -1.05
LSMEM1-203ENST00000455302 DDR2Q16832 855 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 CCDC152Q4G0S7 254 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 DACT2Q5SW24 774 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 EGFLAMQ63HQ2 1017 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 TREML4Q6UXN2 200 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 PLBD2Q8NHP8 589 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 SH3TC2Q8TF17 1288 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 KLHDC7BQ96G42 594 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 ISCA1Q9BUE6 129 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 PCGF6Q9BYE7 350 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 DEFB129Q9H1M3 183 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 MSRB2Q9Y3D2 182 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 TRIOBPQ9H2D6 2365 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 SYNGAP1Q96PV0 1343 aa8.51□□□□□ -1.05
LSMEM1-203ENST00000455302 COL4A1P02462 1669 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 POLR2AP24928 1970 aaKnown RBP8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 COL6A3P12111 3177 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 WTIPA6NIX2 430 aaPredicted RBP8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 MEIS3P2A8K0S8 358 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 TERTO14746 1132 aaKnown RBP8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 OIP5O43482 229 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 HTR3BO95264 441 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 AMPD1P23109 780 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 MMP14P50281 582 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 CHMP4BP1P59074 171 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 CAP1Q01518 475 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 STRIP1Q5VSL9 837 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 JAZF1Q86VZ6 243 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 ANKRD18AQ8IVF6 992 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 DTWD1Q8N5C7 304 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 PLPPR2Q96GM1 343 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 USP26Q9BXU7 913 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 RAD18Q9NS91 495 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 CHPF2Q9P2E5 772 aa8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 MRPL42Q9Y6G3 142 aaKnown RBP8.5□□□□□ -1.05
LSMEM1-203ENST00000455302 RBBP6Q7Z6E9 1792 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 PDPK1O15530 556 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 BCRP11274 1271 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 PLCG1P19174 1290 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 IREB2P48200 963 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 INPP5AQ14642 412 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 RASA3Q14644 834 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 KIF22Q14807 665 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 SUPT20HL1Q3ZLR7 823 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 LARP1BQ659C4 914 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 LRFN4Q6PJG9 635 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 TAB3Q8N5C8 712 aaPredicted RBP8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 ZBTB38Q8NAP3 1195 aaPredicted RBP8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 ZSCAN1Q8NBB4 408 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 TMEM40Q8WWA1 233 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 PTPN18Q99952 460 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 HTATIP2Q9BUP3 242 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 PNNQ9H307 717 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 ST7Q9NRC1 585 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 GMIPQ9P107 970 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 SCN9AQ15858 1988 aa8.49□□□□□ -1.05
LSMEM1-203ENST00000455302 COL1A1P02452 1464 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms