RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 SNX27Q96L92 541 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 CSRNP2Q9H175 543 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 ZSWIM5Q9P217 1185 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 SLC4A7Q9Y6M7 1214 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 CCT6AP40227 531 aaKnown RBP10.63□□□□□ -0.71
LINC01940-201ENST00000455228 TOB1P50616 345 aaPredicted RBP10.63□□□□□ -0.71
LINC01940-201ENST00000455228 ZNF132P52740 706 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 CTDSPL2Q05D32 466 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 NT5DC1Q5TFE4 455 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 MFSD6Q6ZSS7 791 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 SLC35F6Q8N357 371 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 NKX2-3Q8TAU0 364 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 PNKPQ96T60 521 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 SETDB2Q96T68 719 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 NUP88Q99567 741 aaPredicted RBP10.63□□□□□ -0.71
LINC01940-201ENST00000455228 NAPGQ99747 312 aaPredicted RBP10.63□□□□□ -0.71
LINC01940-201ENST00000455228 KAT14Q9H8E8 782 aa10.63□□□□□ -0.71
LINC01940-201ENST00000455228 DMAP1Q9NPF5 467 aaPredicted RBP10.63□□□□□ -0.71
LINC01940-201ENST00000455228 TTF2Q9UNY4 1162 aaKnown RBP10.63□□□□□ -0.71
LINC01940-201ENST00000455228 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 MEGF6O75095 1541 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 N4BP3O15049 544 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 IFNAR1P17181 557 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 SARSP49591 514 aaKnown RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 TBC1D9BQ66K14 1250 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 FAAH2Q6GMR7 532 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 NEPROQ6NW34 567 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 USP49Q70CQ1 688 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 SGMS1Q86VZ5 419 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 ARL10Q8N8L6 244 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 CABLES1Q8TDN4 633 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 CDC5LQ99459 802 aaKnown RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 FOXP1Q9H334 677 aaPredicted RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 SUGCTQ9HAC7 445 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 KCNMB3Q9NPA1 279 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 A0A0U1RQJ8 604 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 PPP4CP60510 307 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 PLOD1Q02809 727 aaPredicted RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 GSTM4Q03013 218 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 WTAPQ15007 396 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 ZFYVE27Q5T4F4 411 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 SEPT14Q6ZU15 432 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 RNF168Q8IYW5 571 aaPredicted RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 ATRIPQ8WXE1 791 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 FAM217BQ9NTX9 383 aaPredicted RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 EXOC1Q9NV70 894 aa10.62□□□□□ -0.71
LINC01940-201ENST00000455228 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 SRPRBQ9Y5M8 271 aaKnown RBP10.62□□□□□ -0.71
LINC01940-201ENST00000455228 MFAP3LO75121 409 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 PARP1P09874 1014 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 GHRP10912 638 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 ALOX15P16050 662 aaPredicted RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 PDE6AP16499 860 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 LIFRP42702 1097 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 CD97P48960 835 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 CSE1LP55060 971 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 ATP2B2Q01814 1243 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 UBE3CQ15386 1083 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 FXNQ16595 210 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 GALNT17Q6IS24 598 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 TTC30AQ86WT1 665 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 SMYD4Q8IYR2 804 aaPredicted RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 NSMCE1Q8WV22 266 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 CNNM2Q9H8M5 875 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 CTNNAL1Q9UBT7 734 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 WWC3Q9ULE0 1092 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 STK36Q9NRP7 1315 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 CFAP69A5D8W1 941 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 TRIM75PA6NK02 468 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 TMCC1O94876 653 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 DEXIO95424 95 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 MSL3P1P0C860 447 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 HOXD12P35452 270 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 ABL2P42684 1182 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 TCIRG1Q13488 830 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 WHAMMP3Q1A5X7 153 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 OLFML1Q6UWY5 402 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 KIF6Q6ZMV9 814 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 ZNF579Q8NAF0 562 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 C1orf131Q8NDD1 294 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 OPTNQ96CV9 577 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 KRT23Q9C075 422 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 PIH1D3Q9NQM4 214 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 GALNT8Q9NY28 637 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 SPEF2Q9C093 1822 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 TBKBP1A7MCY6 615 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 PRPF3O43395 683 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 ACTN4O43707 911 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 CASP1P29466 404 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 CBX3Q13185 183 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 TRIM71Q2Q1W2 868 aaKnown RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 ACCSLQ4AC99 568 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 RASGRP2Q7LDG7 609 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 TMTC1Q8IUR5 882 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 MYO1HQ8N1T3 1032 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 SH3GL1Q99961 368 aa10.61□□□□□ -0.71
LINC01940-201ENST00000455228 RABL2AQ9UBK7 228 aaPredicted RBP10.61□□□□□ -0.71
LINC01940-201ENST00000455228 MYPNQ86TC9 1320 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms