RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 KCNV1Q6PIU1 500 aa20.4■□□□□ 0.86
COPS7A-202ENST00000455113 POLR3EQ9NVU0 708 aa20.4■□□□□ 0.86
COPS7A-202ENST00000455113 MRVI1Q9Y6F6 885 aa20.4■□□□□ 0.86
COPS7A-202ENST00000455113 KIAA1217Q5T5P2 1943 aa20.39■□□□□ 0.86
COPS7A-202ENST00000455113 CTAGE5O15320 804 aa20.39■□□□□ 0.86
COPS7A-202ENST00000455113 TLE2Q04725 743 aa20.39■□□□□ 0.86
COPS7A-202ENST00000455113 CXCL17Q6UXB2 119 aa20.39■□□□□ 0.86
COPS7A-202ENST00000455113 TOX2Q96NM4 488 aa20.39■□□□□ 0.86
COPS7A-202ENST00000455113 SEZ6LQ9BYH1 1024 aa20.39■□□□□ 0.86
COPS7A-202ENST00000455113 hCG_1984214I3L0E3 225 aa20.39■□□□□ 0.85
COPS7A-202ENST00000455113 PIK3CDO00329 1044 aa20.39■□□□□ 0.85
COPS7A-202ENST00000455113 CLTBP09497 229 aa20.39■□□□□ 0.85
COPS7A-202ENST00000455113 ANKRD1Q15327 319 aa20.39■□□□□ 0.85
COPS7A-202ENST00000455113 TMEM63BQ5T3F8 832 aa20.39■□□□□ 0.85
COPS7A-202ENST00000455113 ZNF713Q8N859 430 aaPredicted RBP20.39■□□□□ 0.85
COPS7A-202ENST00000455113 LARP6Q9BRS8 491 aaKnown RBP20.39■□□□□ 0.85
COPS7A-202ENST00000455113 AGXT2Q9BYV1 514 aa20.39■□□□□ 0.85
COPS7A-202ENST00000455113 RBM27Q9P2N5 1060 aaKnown RBP20.39■□□□□ 0.85
COPS7A-202ENST00000455113 V9GY48 417 aaPredicted RBP20.39■□□□□ 0.85
COPS7A-202ENST00000455113 CNTNAP5Q8WYK1 1306 aa20.38■□□□□ 0.85
COPS7A-202ENST00000455113 ARVCFO00192 962 aa20.38■□□□□ 0.85
COPS7A-202ENST00000455113 TLR3O15455 904 aaKnown RBP20.38■□□□□ 0.85
COPS7A-202ENST00000455113 GH1P01241 217 aa20.38■□□□□ 0.85
COPS7A-202ENST00000455113 MAGEA10P43363 369 aaPredicted RBP20.38■□□□□ 0.85
COPS7A-202ENST00000455113 AKAP17AQ02040 695 aaKnown RBP20.38■□□□□ 0.85
COPS7A-202ENST00000455113 GNPTABQ3T906 1256 aa20.38■□□□□ 0.85
COPS7A-202ENST00000455113 USP17L6PQ6QN14 398 aa20.38■□□□□ 0.85
COPS7A-202ENST00000455113 VSIG10LQ86VR7 867 aa20.38■□□□□ 0.85
COPS7A-202ENST00000455113 HSCBQ8IWL3 235 aa20.38■□□□□ 0.85
COPS7A-202ENST00000455113 DNAH12Q6ZR08 3092 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 A0A1W2PPC1 479 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 SPDYE3A6NKU9 549 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 KPNA6O60684 536 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 STAM2O75886 525 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 MYL3P08590 195 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 PTGS1P23219 599 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 CDC27P30260 824 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 MCM2P49736 904 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 NAPAP54920 295 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 LY6KQ17RY6 165 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 ANKRD33Q7Z3H0 272 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 GPKOWQ92917 476 aaPredicted RBP eCLIP20.37■□□□□ 0.85
COPS7A-202ENST00000455113 GDF15Q99988 308 aa20.37■□□□□ 0.85
COPS7A-202ENST00000455113 BMP8BP34820 402 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 ADD1P35611 737 aaKnown RBP20.36■□□□□ 0.85
COPS7A-202ENST00000455113 MDM2Q00987 491 aaPredicted RBP20.36■□□□□ 0.85
COPS7A-202ENST00000455113 ITGA7Q13683 1181 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 CCDC62Q6P9F0 684 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 COPS5Q92905 334 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 UBE2OQ9C0C9 1292 aaKnown RBP20.36■□□□□ 0.85
COPS7A-202ENST00000455113 EHMT1Q9H9B1 1298 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 PDLIM7Q9NR12 457 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 TMEM39AQ9NV64 488 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 MEIS2O14770 477 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 ARIH2O95376 493 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 TGFB3P10600 412 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 BECN1Q14457 450 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 PPP1R18Q6NYC8 613 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 GLT8D2Q9H1C3 349 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 DDX41Q9UJV9 622 aaKnown RBP20.36■□□□□ 0.85
COPS7A-202ENST00000455113 LIMCH1Q9UPQ0 1083 aa20.36■□□□□ 0.85
COPS7A-202ENST00000455113 A6NJR5 290 aa20.35■□□□□ 0.85
COPS7A-202ENST00000455113 RAG1P15918 1043 aa20.35■□□□□ 0.85
COPS7A-202ENST00000455113 WWC2Q6AWC2 1192 aa20.35■□□□□ 0.85
COPS7A-202ENST00000455113 TEX2Q8IWB9 1127 aa20.35■□□□□ 0.85
COPS7A-202ENST00000455113 DHX37Q8IY37 1157 aaKnown RBP20.35■□□□□ 0.85
COPS7A-202ENST00000455113 MTG1Q9BT17 334 aaPredicted RBP20.35■□□□□ 0.85
COPS7A-202ENST00000455113 FAM217BQ9NTX9 383 aaPredicted RBP20.35■□□□□ 0.85
COPS7A-202ENST00000455113 TPCN1Q9ULQ1 816 aa20.35■□□□□ 0.85
COPS7A-202ENST00000455113 K7ELQ4 463 aaPredicted RBP20.34■□□□□ 0.85
COPS7A-202ENST00000455113 PURAQ00577 322 aaKnown RBP20.34■□□□□ 0.85
COPS7A-202ENST00000455113 LAMC2Q13753 1193 aa20.34■□□□□ 0.85
COPS7A-202ENST00000455113 XRRA1Q6P2D8 792 aa20.34■□□□□ 0.85
COPS7A-202ENST00000455113 CCDC12Q8WUD4 166 aaPredicted RBP20.34■□□□□ 0.85
COPS7A-202ENST00000455113 CDK7P50613 346 aa20.33■□□□□ 0.85
COPS7A-202ENST00000455113 FUT2Q10981 343 aa20.33■□□□□ 0.85
COPS7A-202ENST00000455113 IL31RAQ8NI17 732 aa20.33■□□□□ 0.85
COPS7A-202ENST00000455113 PRO3102Q9H379 93 aa20.33■□□□□ 0.85
COPS7A-202ENST00000455113 BARHL2Q9NY43 387 aa20.33■□□□□ 0.85
COPS7A-202ENST00000455113 NID2Q14112 1375 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 FRMPD4Q14CM0 1322 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 CPLX1O14810 134 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 PDIA3P30101 505 aaKnown RBP20.33■□□□□ 0.84
COPS7A-202ENST00000455113 ADCY7P51828 1080 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 EVCP57679 992 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 CCT2P78371 535 aaKnown RBP20.33■□□□□ 0.84
COPS7A-202ENST00000455113 FAAP100Q0VG06 881 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 DGKDQ16760 1214 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 PCNX4Q63HM2 1172 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.84
COPS7A-202ENST00000455113 NLRX1Q86UT6 975 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 AFG1LQ8WV93 481 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 TMX3Q96JJ7 454 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 MLXIPQ9HAP2 919 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 RTEL1Q9NZ71 1219 aa20.33■□□□□ 0.84
COPS7A-202ENST00000455113 SMCO2A6NFE2 343 aa20.32■□□□□ 0.84
COPS7A-202ENST00000455113 SCG2P13521 617 aa20.32■□□□□ 0.84
COPS7A-202ENST00000455113 PSMC6P62333 389 aa20.32■□□□□ 0.84
COPS7A-202ENST00000455113 PFKFB3Q16875 520 aaPredicted RBP20.32■□□□□ 0.84
COPS7A-202ENST00000455113 SH3RF1Q7Z6J0 888 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms