RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 EFCAB14O75071 495 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 CA3P07451 260 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 IQCF3P0C7M6 154 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 SNHG28P0DPA3 235 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 KCNJ6P48051 423 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 HDAC1Q13547 482 aaPredicted RBP9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 AAMPQ13685 434 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 SKIV2LQ15477 1246 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 RASGRP2Q7LDG7 609 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 SESTD1Q86VW0 696 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 MICALL1Q8N3F8 863 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 NSUN6Q8TEA1 469 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 IWS1Q96ST2 819 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 KATNAL1Q9BW62 490 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 C1QTNF1Q9BXJ1 281 aa9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 DDX49Q9Y6V7 483 aaKnown RBP9.39□□□□□ -0.91
NIF3L1-209ENST00000454952 LAMA4Q16363 1823 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 TCF20Q9UGU0 1960 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 A0A0D9SFI3 127 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 TRIM6-TRIM34B2RNG4 842 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 ZNF213O14771 459 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 GH1P01241 217 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 CASTP20810 708 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 COL9A1P20849 921 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 PTGS1P23219 599 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 STXBP2Q15833 593 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 PTGISQ16647 500 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 ASPRV1Q53RT3 343 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 TMEM63BQ5T3F8 832 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 HERC6Q8IVU3 1022 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 FAM227BQ96M60 508 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 KAT14Q9H8E8 782 aa9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
NIF3L1-209ENST00000454952 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 HIP1O00291 1037 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 TLL1O43897 1013 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 MYOGP15173 224 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 SELPP16109 830 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 HAND2P61296 217 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 TRAF1Q13077 416 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 NMIQ13287 307 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 CDC37Q16543 378 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 DGKDQ16760 1214 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 USH1GQ495M9 461 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 CCDC62Q6P9F0 684 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 KCNV1Q6PIU1 500 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 KCNV2Q8TDN2 545 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 VWCEQ96DN2 955 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 BMP2KQ9NSY1 1161 aaPredicted RBP9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 MTCH2Q9Y6C9 303 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 MYH7BA7E2Y1 1941 aa9.37□□□□□ -0.91
NIF3L1-209ENST00000454952 ABHD14A-ACY1A0A1B0GW23 586 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 DHX16O60231 1041 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 EIF3JO75822 258 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 MMP3P08254 477 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 PARP1P09874 1014 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 BMP1P13497 986 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 RRP1P56182 461 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 CHMP4BP1P59074 171 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 TAP1Q03518 808 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 RBL2Q08999 1139 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 LAMC2Q13753 1193 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 ARHGEF16Q5VV41 709 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 CNKSR3Q6P9H4 555 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 SEPT14Q6ZU15 432 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 LRRC8DQ7L1W4 858 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 SAMD3Q8N6K7 520 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 C7orf31Q8N865 590 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 SYTL5Q8TDW5 730 aaPredicted RBP9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 AFG1LQ8WV93 481 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 ARNTL2Q8WYA1 636 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 ANKS1AQ92625 1134 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 RILPL2Q969X0 211 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 RMDN3Q96TC7 470 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 ZBED2Q9BTP6 218 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 CNNM2Q9H8M5 875 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 MAP3K20Q9NYL2 800 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 CTNNA3Q9UI47 895 aa9.36□□□□□ -0.91
NIF3L1-209ENST00000454952 EMSYQ7Z589 1322 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 GOLGA8HP0CJ92 632 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 SDSP20132 328 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 ARHGAP1Q07960 439 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 ZNF589Q86UQ0 364 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 FBXO11Q86XK2 927 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 TBC1D10CQ8IV04 446 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 ADGRF4Q8IZF3 695 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 PPTC7Q8NI37 304 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 COPS5Q92905 334 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 HLA-CQ95604 372 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 ZSCAN10Q96SZ4 725 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 UBAC1Q9BSL1 405 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 AMNQ9BXJ7 453 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 KRT23Q9C075 422 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 DIAPH3Q9NSV4 1193 aa9.35□□□□□ -0.91
NIF3L1-209ENST00000454952 GTF2IRD1Q9UHL9 959 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms