RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 CYP46A1Q9Y6A2 500 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 ELP1O95163 1332 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 A0A0U1RQG5 324 aaPredicted RBP28.65■■■□□ 2.18
MSH2-203ENST00000454849 EPB41L2O43491 1005 aaKnown RBP28.65■■■□□ 2.18
MSH2-203ENST00000454849 RGS20O76081 388 aa28.65■■■□□ 2.18
MSH2-203ENST00000454849 RTEL1Q9NZ71 1219 aa28.65■■■□□ 2.18
MSH2-203ENST00000454849 MRVI1Q9Y6F6 885 aa28.65■■■□□ 2.18
MSH2-203ENST00000454849 RANBP2P49792 3224 aaKnown RBP28.65■■■□□ 2.18
MSH2-203ENST00000454849 SEC24BO95487 1268 aa28.64■■■□□ 2.18
MSH2-203ENST00000454849 CCND2P30279 289 aa28.64■■■□□ 2.18
MSH2-203ENST00000454849 CCT2P78371 535 aaKnown RBP28.64■■■□□ 2.18
MSH2-203ENST00000454849 TOB2Q14106 344 aaPredicted RBP28.64■■■□□ 2.18
MSH2-203ENST00000454849 TYW1BQ6NUM6 668 aa28.64■■■□□ 2.18
MSH2-203ENST00000454849 AFG1LQ8WV93 481 aa28.64■■■□□ 2.18
MSH2-203ENST00000454849 LBHD1Q9BQE6 289 aaPredicted RBP28.64■■■□□ 2.18
MSH2-203ENST00000454849 UBE2OQ9C0C9 1292 aaKnown RBP28.64■■■□□ 2.18
MSH2-203ENST00000454849 NCOA5Q9HCD5 579 aaKnown RBP28.64■■■□□ 2.18
MSH2-203ENST00000454849 GRIN2DO15399 1336 aa28.64■■■□□ 2.17
MSH2-203ENST00000454849 DCDC2CA8MYV0 355 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 ARVCFO00192 962 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 NKRFO15226 690 aaKnown RBP eCLIP28.63■■■□□ 2.17
MSH2-203ENST00000454849 CLTBP09497 229 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 ITGB8P26012 769 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 CDK7P50613 346 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 CHMP4BP1P59074 171 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 FAAP100Q0VG06 881 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 TMEM39AQ9NV64 488 aa28.63■■■□□ 2.17
MSH2-203ENST00000454849 DDX41Q9UJV9 622 aaKnown RBP28.63■■■□□ 2.17
MSH2-203ENST00000454849 CPT1AP50416 773 aa28.62■■■□□ 2.17
MSH2-203ENST00000454849 NAPAP54920 295 aa28.62■■■□□ 2.17
MSH2-203ENST00000454849 ARHGAP1Q07960 439 aa28.62■■■□□ 2.17
MSH2-203ENST00000454849 ITGA7Q13683 1181 aa28.62■■■□□ 2.17
MSH2-203ENST00000454849 ANKRD33Q7Z3H0 272 aa28.62■■■□□ 2.17
MSH2-203ENST00000454849 BADQ92934 168 aa28.62■■■□□ 2.17
MSH2-203ENST00000454849 AGXT2Q9BYV1 514 aa28.62■■■□□ 2.17
MSH2-203ENST00000454849 GH1P01241 217 aa28.61■■■□□ 2.17
MSH2-203ENST00000454849 PDIA3P30101 505 aaKnown RBP28.61■■■□□ 2.17
MSH2-203ENST00000454849 MRPS9P82933 396 aaKnown RBP28.61■■■□□ 2.17
MSH2-203ENST00000454849 PHKBQ93100 1093 aa28.61■■■□□ 2.17
MSH2-203ENST00000454849 BCAS3Q9H6U6 928 aa28.61■■■□□ 2.17
MSH2-203ENST00000454849 PDRG1Q9NUG6 133 aa28.61■■■□□ 2.17
MSH2-203ENST00000454849 PIK3CDO00329 1044 aa28.6■■■□□ 2.17
MSH2-203ENST00000454849 CABYRO75952 493 aa28.6■■■□□ 2.17
MSH2-203ENST00000454849 PURAQ00577 322 aaKnown RBP28.6■■■□□ 2.17
MSH2-203ENST00000454849 SP2Q02086 613 aa28.6■■■□□ 2.17
MSH2-203ENST00000454849 FBXL16Q8N461 479 aa28.6■■■□□ 2.17
MSH2-203ENST00000454849 TM6SF1Q9BZW5 370 aa28.6■■■□□ 2.17
MSH2-203ENST00000454849 A6NJR5 290 aa28.59■■■□□ 2.17
MSH2-203ENST00000454849 STXBP3O00186 592 aa28.59■■■□□ 2.17
MSH2-203ENST00000454849 RCAN1P53805 252 aa28.59■■■□□ 2.17
MSH2-203ENST00000454849 STK3Q13188 491 aa28.59■■■□□ 2.17
MSH2-203ENST00000454849 TOX2Q96NM4 488 aa28.59■■■□□ 2.17
MSH2-203ENST00000454849 TRPV6Q9H1D0 765 aa28.59■■■□□ 2.17
MSH2-203ENST00000454849 POLR3EQ9NVU0 708 aa28.59■■■□□ 2.17
MSH2-203ENST00000454849 CCDC196A0A1B0GTZ2 297 aa28.58■■■□□ 2.17
MSH2-203ENST00000454849 BRDTQ58F21 947 aaPredicted RBP28.58■■■□□ 2.17
MSH2-203ENST00000454849 PGBD1Q96JS3 809 aa28.58■■■□□ 2.17
MSH2-203ENST00000454849 MTG1Q9BT17 334 aaPredicted RBP28.58■■■□□ 2.17
MSH2-203ENST00000454849 KIAA1217Q5T5P2 1943 aa28.58■■■□□ 2.17
MSH2-203ENST00000454849 RAG1P15918 1043 aa28.57■■■□□ 2.16
MSH2-203ENST00000454849 BMP8BP34820 402 aa28.57■■■□□ 2.16
MSH2-203ENST00000454849 FAM126BQ8IXS8 530 aa28.57■■■□□ 2.16
MSH2-203ENST00000454849 DHX37Q8IY37 1157 aaKnown RBP28.57■■■□□ 2.16
MSH2-203ENST00000454849 SLC43A3Q8NBI5 491 aa28.57■■■□□ 2.16
MSH2-203ENST00000454849 FRMPD4Q14CM0 1322 aa28.57■■■□□ 2.16
MSH2-203ENST00000454849 SMCO2A6NFE2 343 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 KIAA0355O15063 1070 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 DTNBO60941 627 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 GGPS1O95749 300 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 MMP3P08254 477 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 FXR1P51114 621 aaKnown RBP eCLIP28.56■■■□□ 2.16
MSH2-203ENST00000454849 NBPF20Q3BBV1 942 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 TMEM260Q9NX78 707 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 PCDHA6Q9UN73 950 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 PCDHA8Q9Y5H6 950 aa28.56■■■□□ 2.16
MSH2-203ENST00000454849 ADAMTS3O15072 1205 aa28.55■■■□□ 2.16
MSH2-203ENST00000454849 UBA1P22314 1058 aaKnown RBP28.55■■■□□ 2.16
MSH2-203ENST00000454849 ADCY7P51828 1080 aa28.55■■■□□ 2.16
MSH2-203ENST00000454849 EVCP57679 992 aa28.55■■■□□ 2.16
MSH2-203ENST00000454849 FAM47CQ5HY64 1035 aa28.55■■■□□ 2.16
MSH2-203ENST00000454849 SLC26A6Q9BXS9 759 aa28.55■■■□□ 2.16
MSH2-203ENST00000454849 PPP1R12CQ9BZL4 782 aa28.55■■■□□ 2.16
MSH2-203ENST00000454849 BARHL2Q9NY43 387 aa28.55■■■□□ 2.16
MSH2-203ENST00000454849 MROH7Q68CQ1 1323 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 SPDYE3A6NKU9 549 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 TLR3O15455 904 aaKnown RBP28.54■■■□□ 2.16
MSH2-203ENST00000454849 SCG2P13521 617 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 SEMA3FQ13275 785 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 NTRK3Q16288 839 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 PKN1Q16512 942 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 PFKFB3Q16875 520 aaPredicted RBP28.54■■■□□ 2.16
MSH2-203ENST00000454849 CELF3Q5SZQ8 465 aaKnown RBP28.54■■■□□ 2.16
MSH2-203ENST00000454849 PCNX4Q63HM2 1172 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 RIC8AQ9NPQ8 531 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 TRMT13Q9NUP7 481 aaKnown RBP28.54■■■□□ 2.16
MSH2-203ENST00000454849 TBX21Q9UL17 535 aa28.54■■■□□ 2.16
MSH2-203ENST00000454849 B4GALT4O60513 344 aa28.53■■■□□ 2.16
MSH2-203ENST00000454849 CD4P01730 458 aa28.53■■■□□ 2.16
MSH2-203ENST00000454849 LAMC2Q13753 1193 aa28.53■■■□□ 2.16
MSH2-203ENST00000454849 MYSM1Q5VVJ2 828 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms