RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 FAM20AQ96MK3 541 aa24.02■■□□□ 1.44
CTU2-202ENST00000453996 RABGAP1Q9Y3P9 1069 aa24.02■■□□□ 1.44
CTU2-202ENST00000453996 IKBKBO14920 756 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 PPATQ06203 517 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 GRB10Q13322 594 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 ERO1BQ86YB8 467 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 LRRC15Q8TF66 581 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 STK17AQ9UEE5 414 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 IGLV3-22A0A075B6J6 115 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 TPM4P67936 248 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 CLMNQ96JQ2 1002 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 TRERF1Q96PN7 1200 aa24.01■■□□□ 1.43
CTU2-202ENST00000453996 MOB2Q70IA6 237 aa24■■□□□ 1.43
CTU2-202ENST00000453996 OTUD5Q96G74 571 aa24■■□□□ 1.43
CTU2-202ENST00000453996 PNMA5Q96PV4 448 aa24■■□□□ 1.43
CTU2-202ENST00000453996 RMND1Q9NWS8 449 aa24■■□□□ 1.43
CTU2-202ENST00000453996 HOXC10Q9NYD6 342 aa24■■□□□ 1.43
CTU2-202ENST00000453996 RPTORQ8N122 1335 aa24■■□□□ 1.43
CTU2-202ENST00000453996 A0A0G2JMZ2 1700 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 KDM3AQ9Y4C1 1321 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 SPDYE5A6NIY4 337 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 MSH4O15457 936 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 SLC26A4O43511 780 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 UBXN2AP68543 259 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 MYL5Q02045 173 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 ARMC9Q7Z3E5 817 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 UIMC1Q96RL1 719 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 RNF146Q9NTX7 359 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 COL20A1Q9P218 1284 aa23.99■■□□□ 1.43
CTU2-202ENST00000453996 ZNF214Q9UL59 606 aaPredicted RBP23.99■■□□□ 1.43
CTU2-202ENST00000453996 SPDYE16A6NNV3 312 aaPredicted RBP23.98■■□□□ 1.43
CTU2-202ENST00000453996 ATP2A1O14983 1001 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 RPN1P04843 607 aaKnown RBP23.98■■□□□ 1.43
CTU2-202ENST00000453996 TMEM119Q4V9L6 283 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 SNRNP48Q6IEG0 339 aaKnown RBP23.98■■□□□ 1.43
CTU2-202ENST00000453996 SARM1Q6SZW1 724 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 CYP2W1Q8TAV3 490 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 CLEC11AQ9Y240 323 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 A0A0G2JLL6 359 aaPredicted RBP23.98■■□□□ 1.43
CTU2-202ENST00000453996 AMPD3Q01432 767 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 NCAPHQ15003 741 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 CEP55Q53EZ4 464 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 CT47A1Q5JQC4 288 aaPredicted RBP23.98■■□□□ 1.43
CTU2-202ENST00000453996 TREML2Q5T2D2 321 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 PRRT2Q7Z6L0 340 aaPredicted RBP23.98■■□□□ 1.43
CTU2-202ENST00000453996 SYTL5Q8TDW5 730 aaPredicted RBP23.98■■□□□ 1.43
CTU2-202ENST00000453996 NUDT12Q9BQG2 462 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 TRIM5Q9C035 493 aa23.98■■□□□ 1.43
CTU2-202ENST00000453996 IRF6O14896 467 aa23.97■■□□□ 1.43
CTU2-202ENST00000453996 SETQ01105 290 aaPredicted RBP23.97■■□□□ 1.43
CTU2-202ENST00000453996 SPIRE1Q08AE8 756 aa23.97■■□□□ 1.43
CTU2-202ENST00000453996 TMEM132BQ14DG7 1078 aa23.97■■□□□ 1.43
CTU2-202ENST00000453996 HYIQ5T013 277 aa23.97■■□□□ 1.43
CTU2-202ENST00000453996 PLA2G4DQ86XP0 818 aa23.97■■□□□ 1.43
CTU2-202ENST00000453996 PROCA1Q8NCQ7 364 aaPredicted RBP23.97■■□□□ 1.43
CTU2-202ENST00000453996 TEX13BQ9BXU2 312 aa23.97■■□□□ 1.43
CTU2-202ENST00000453996 NT5C3AQ9H0P0 336 aa23.97■■□□□ 1.43
CTU2-202ENST00000453996 FRMPD4Q14CM0 1322 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 CXCL11O14625 94 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 CCT6AP40227 531 aaKnown RBP23.96■■□□□ 1.43
CTU2-202ENST00000453996 RPS6P62753 249 aaKnown RBP23.96■■□□□ 1.43
CTU2-202ENST00000453996 PPIL2Q13356 520 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 SLC30A10Q6XR72 485 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 GADL1Q6ZQY3 521 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 RNF207Q6ZRF8 634 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 LARP4BQ92615 738 aaKnown RBP23.96■■□□□ 1.43
CTU2-202ENST00000453996 BLOC1S4Q9NUP1 217 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 RIPK3Q9Y572 518 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 STK24Q9Y6E0 443 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 STAT3P40763 770 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 ZNF75DP51815 510 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 SEMA3FQ13275 785 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 TKFCQ3LXA3 575 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 HAUS3Q68CZ6 603 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 SV2BQ7L1I2 683 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 ERMNQ8TAM6 284 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 RAD54LQ92698 747 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 C7orf25Q9BPX7 421 aa23.96■■□□□ 1.43
CTU2-202ENST00000453996 ERCC5P28715 1186 aaPredicted RBP23.95■■□□□ 1.42
CTU2-202ENST00000453996 KCNB1Q14721 858 aa23.95■■□□□ 1.42
CTU2-202ENST00000453996 NSMFQ6X4W1 530 aa23.95■■□□□ 1.42
CTU2-202ENST00000453996 TRIM9Q9C026 710 aa23.95■■□□□ 1.42
CTU2-202ENST00000453996 VAV3Q9UKW4 847 aa23.95■■□□□ 1.42
CTU2-202ENST00000453996 KCNH4Q9UQ05 1017 aa23.95■■□□□ 1.42
CTU2-202ENST00000453996 MEIS1O00470 390 aa23.94■■□□□ 1.42
CTU2-202ENST00000453996 POTEIP0CG38 1075 aa23.94■■□□□ 1.42
CTU2-202ENST00000453996 POTEJP0CG39 1038 aa23.94■■□□□ 1.42
CTU2-202ENST00000453996 ZNF658Q5TYW1 1059 aaPredicted RBP23.94■■□□□ 1.42
CTU2-202ENST00000453996 NCAPH2Q6IBW4 605 aa23.94■■□□□ 1.42
CTU2-202ENST00000453996 SLC5A5Q92911 643 aa23.94■■□□□ 1.42
CTU2-202ENST00000453996 PTMAP06454 111 aaKnown RBP23.93■■□□□ 1.42
CTU2-202ENST00000453996 HOXA7P31268 230 aaPredicted RBP23.93■■□□□ 1.42
CTU2-202ENST00000453996 ECM1Q16610 540 aa23.93■■□□□ 1.42
CTU2-202ENST00000453996 HS1BP3Q53T59 392 aa23.93■■□□□ 1.42
CTU2-202ENST00000453996 PCNX4Q63HM2 1172 aa23.93■■□□□ 1.42
CTU2-202ENST00000453996 OPTNQ96CV9 577 aa23.93■■□□□ 1.42
CTU2-202ENST00000453996 MXRA8Q9BRK3 442 aa23.93■■□□□ 1.42
CTU2-202ENST00000453996 KLRC4O43908 158 aa23.93■■□□□ 1.42
CTU2-202ENST00000453996 FMR1Q06787 632 aaKnown RBP eCLIP23.93■■□□□ 1.42
CTU2-202ENST00000453996 DHX8Q14562 1220 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms