RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 ARIH2O95376 493 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 ASGR1P07306 291 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 MYCLP12524 364 aaPredicted RBP16.84■□□□□ 0.29
VPS16-205ENST00000453689 RTP1P59025 263 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 SCRN1Q12765 414 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 SNX17Q15036 470 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 NTRK3Q16288 839 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 SEPT14Q6ZU15 432 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 PCSK9Q8NBP7 692 aaKnown RBP16.84■□□□□ 0.29
VPS16-205ENST00000453689 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
VPS16-205ENST00000453689 hCG_1984214I3L0E3 225 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 STXBP3O00186 592 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 NKRFO15226 690 aaKnown RBP eCLIP16.83■□□□□ 0.28
VPS16-205ENST00000453689 TXNP10599 105 aaKnown RBP16.83■□□□□ 0.28
VPS16-205ENST00000453689 CCND2P30279 289 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 NAPAP54920 295 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 TTLL4Q14679 1199 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 FSCN1Q16658 493 aaKnown RBP16.83■□□□□ 0.28
VPS16-205ENST00000453689 UBE2SQ16763 222 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 PFKFB3Q16875 520 aaPredicted RBP16.83■□□□□ 0.28
VPS16-205ENST00000453689 PPP1R18Q6NYC8 613 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 CCDC62Q6P9F0 684 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 CPLX2Q6PUV4 134 aaKnown RBP16.83■□□□□ 0.28
VPS16-205ENST00000453689 VSIG10LQ86VR7 867 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 ZNF713Q8N859 430 aaPredicted RBP16.83■□□□□ 0.28
VPS16-205ENST00000453689 OR6J1Q8NGC5 347 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 COPS5Q92905 334 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 PHKBQ93100 1093 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 BARHL2Q9NY43 387 aa16.83■□□□□ 0.28
VPS16-205ENST00000453689 CPLX1O14810 134 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
VPS16-205ENST00000453689 RGS20O76081 388 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 SCG2P13521 617 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 IFNAR1P17181 557 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 LY6KQ17RY6 165 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 C1orf53Q5VUE5 145 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 SNX21Q969T3 373 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 ZFP91Q96JP5 570 aaPredicted RBP16.82■□□□□ 0.28
VPS16-205ENST00000453689 STARD7Q9NQZ5 370 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 CEP290O15078 2479 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 WDR81Q562E7 1941 aa16.82■□□□□ 0.28
VPS16-205ENST00000453689 MRPS9P82933 396 aaKnown RBP16.81■□□□□ 0.28
VPS16-205ENST00000453689 PKN1Q16512 942 aa16.81■□□□□ 0.28
VPS16-205ENST00000453689 TRIM60Q495X7 471 aa16.81■□□□□ 0.28
VPS16-205ENST00000453689 TMX3Q96JJ7 454 aa16.81■□□□□ 0.28
VPS16-205ENST00000453689 GLT1D1Q96MS3 346 aa16.81■□□□□ 0.28
VPS16-205ENST00000453689 SLC26A6Q9BXS9 759 aa16.81■□□□□ 0.28
VPS16-205ENST00000453689 RNF26Q9BY78 433 aaPredicted RBP16.81■□□□□ 0.28
VPS16-205ENST00000453689 RIC8AQ9NPQ8 531 aa16.81■□□□□ 0.28
VPS16-205ENST00000453689 RBM27Q9P2N5 1060 aaKnown RBP16.81■□□□□ 0.28
VPS16-205ENST00000453689 ZMYND8Q9ULU4 1186 aaPredicted RBP16.81■□□□□ 0.28
VPS16-205ENST00000453689 ATP11BQ9Y2G3 1177 aa16.81■□□□□ 0.28
VPS16-205ENST00000453689 TRIP12Q14669 1992 aaPredicted RBP16.8■□□□□ 0.28
VPS16-205ENST00000453689 ELP1O95163 1332 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 ZEB2O60315 1214 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 CDKL5O76039 1030 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 SYN1P17600 705 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 ADCY7P51828 1080 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 AKAP17AQ02040 695 aaKnown RBP16.8■□□□□ 0.28
VPS16-205ENST00000453689 ARHGAP1Q07960 439 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 ST3GAL1Q11201 340 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 DDX41Q9UJV9 622 aaKnown RBP16.8■□□□□ 0.28
VPS16-205ENST00000453689 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
VPS16-205ENST00000453689 KAT6AQ92794 2004 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 SMCO2A6NFE2 343 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 STAM2O75886 525 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 GH1P01241 217 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 CPT1AP50416 773 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 PCNX4Q63HM2 1172 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 CCDC83Q8IWF9 413 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 HSCBQ8IWL3 235 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 VTI1AQ96AJ9 217 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 PCDHA6Q9UN73 950 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 PCDHA8Q9Y5H6 950 aa16.79■□□□□ 0.28
VPS16-205ENST00000453689 A6NJR5 290 aa16.78■□□□□ 0.28
VPS16-205ENST00000453689 SPDYE3A6NKU9 549 aa16.78■□□□□ 0.28
VPS16-205ENST00000453689 K7ELQ4 463 aaPredicted RBP16.78■□□□□ 0.28
VPS16-205ENST00000453689 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
VPS16-205ENST00000453689 KCNV1Q6PIU1 500 aa16.78■□□□□ 0.28
VPS16-205ENST00000453689 TEX2Q8IWB9 1127 aa16.78■□□□□ 0.28
VPS16-205ENST00000453689 INPP4AQ96PE3 977 aaPredicted RBP16.78■□□□□ 0.28
VPS16-205ENST00000453689 POLR3EQ9NVU0 708 aa16.78■□□□□ 0.28
VPS16-205ENST00000453689 RTEL1Q9NZ71 1219 aa16.78■□□□□ 0.28
VPS16-205ENST00000453689 PCDH10Q9P2E7 1040 aa16.78■□□□□ 0.28
VPS16-205ENST00000453689 STK36Q9NRP7 1315 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.28
VPS16-205ENST00000453689 ESYT2A0FGR8 921 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 CABYRO75952 493 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 CTDNEP1O95476 244 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 MYL3P08590 195 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 TGFB3P10600 412 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 CDK7P50613 346 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 PURAQ00577 322 aaKnown RBP16.77■□□□□ 0.28
VPS16-205ENST00000453689 TLE2Q04725 743 aa16.77■□□□□ 0.28
VPS16-205ENST00000453689 SSRP1Q08945 709 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms