RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 FAM20AQ96MK3 541 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MTMR9Q96QG7 549 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PDCD2LQ9BRP1 358 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 RAB34Q9BZG1 259 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TMEM60Q9H2L4 133 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 EFCC1Q9HA90 598 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 IVNS1ABPQ9Y6Y0 642 aa14.19□□□□□ -0.14
HLA-DPA1-244ENST00000453337 ADGRA2Q96PE1 1338 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 LOC102724159A0A0B4J2E5 919 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 VWA3AA6NCI4 1184 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MEIS1O00470 390 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SLC37A4O43826 429 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 NR3C2P08235 984 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 BCRP11274 1271 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 UBXN2AP68543 259 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PDIA5Q14554 519 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PWP2Q15269 919 aaKnown RBP14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TMEM266Q2M3C6 531 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CCDC73Q6ZRK6 1079 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PLA2G4DQ86XP0 818 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FAM133AQ8N9E0 248 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FSIP1Q8NA03 581 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MRPS27Q92552 414 aaKnown RBP14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CLIC6Q96NY7 704 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 ZIC5Q96T25 663 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MXRA8Q9BRK3 442 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PORCNQ9H237 461 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FAM13BQ9NYF5 915 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CPA4Q9UI42 421 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PCDHA12Q9UN75 941 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MRVI1Q9Y6F6 885 aa14.18□□□□□ -0.14
HLA-DPA1-244ENST00000453337 KIAA1217Q5T5P2 1943 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 DNAJC25-GNG10A0A024R161 153 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FAM86B1E9PN63 330 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MAFGO15525 162 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 AOC2O75106 756 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FAM86B2P0C5J1 330 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MYCLP12524 364 aaPredicted RBP14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TXKP42681 527 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SETQ01105 290 aaPredicted RBP14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CNTN2Q02246 1040 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 STXBP2Q15833 593 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 RESP18Q5W5W9 173 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PLEKHH3Q7Z736 793 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 GPT2Q8TD30 523 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SYAP1Q96A49 352 aaPredicted RBP14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 AK8Q96MA6 479 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CSRNP2Q9H175 543 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 JADE2Q9NQC1 790 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 UBIAD1Q9Y5Z9 338 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PLXNB2O15031 1838 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PLXNA1Q9UIW2 1896 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 LCTP09848 1927 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 IGLV3-22A0A075B6J6 115 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SLC15A5A6NIM6 579 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 EIF3JO75822 258 aaKnown RBP14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TECP42680 631 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MRPS9P82933 396 aaKnown RBP14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CRHR2Q13324 411 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 IL17AQ16552 155 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SHC4Q6S5L8 630 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 NLRX1Q86UT6 975 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 HAS1Q92839 578 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PURBQ96QR8 312 aaKnown RBP14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PYM1Q9BRP8 204 aaKnown RBP14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TTC12Q9H892 705 aaPredicted RBP14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 KCNMB3Q9NPA1 279 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SLC5A4Q9NY91 659 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 STK24Q9Y6E0 443 aa14.16□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FAM237AA0A1B0GTK4 181 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 A0A1B0GVL5 298 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 SOWAHBA6NEL2 793 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 ASB14A6NK59 587 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 MSH4O15457 936 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 LIG1P18858 919 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 TXLNAP40222 546 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 ALDH5A1P51649 535 aaPredicted RBP14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 GRIN1Q05586 938 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 FAM160A1Q05DH4 1040 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 GPR142Q7Z601 462 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 DPP9Q86TI2 863 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 IL31RAQ8NI17 732 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 ETNPPLQ8TBG4 499 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 LENG9Q96B70 501 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 CDHR1Q96JP9 859 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 R3HDMLQ9H3Y0 253 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 KCNH3Q9ULD8 1083 aa14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 DIS3Q9Y2L1 958 aaKnown RBP14.15□□□□□ -0.14
HLA-DPA1-244ENST00000453337 PGK2P07205 417 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ITGB5P18084 799 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 ADORA2AP29274 412 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 UBA7P41226 1012 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 SYKP43405 635 aa14.14□□□□□ -0.15
HLA-DPA1-244ENST00000453337 VEGFBP49765 207 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms